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scnpilot_p_inoc_scaffold_80_558

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 571863..573278

Top 3 Functional Annotations

Value Algorithm Source
Two-component system NtrC family nitrogen regulation response regulator GlnG n=1 Tax=Sphingomonas sp. LH128 RepID=J8SMR9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 475.0
  • Bit_score: 702
  • Evalue 2.40e-199
  • rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KHK91514.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 472.0
  • Bit_score: 704
  • Evalue 9.00e-200
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 473.0
  • Bit_score: 688
  • Evalue 1.00e-195

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGAGCATTTTGCTGGTTGAGGACGATGAGTCCATCGCCATCGTCATCACCGCCGCACTGGAGGCCGAGGGTTTTTCGGTGGTGCGCTGCGATTCAATCGTCGAGCGCGACCGCCTGCTGGCCACACGGGAGTTTTCCGCGCTGGTCACCGATGTGATGCTGACCGATGGCGATGGGATCGAGACGCTGGGCCGCGTGCGCGAGATACATCCGGATCTGCCGGTGATCGTGCTCTCGGCGCAGAACACGCTGGATACGGCGGTGCGCGCGTCGGACACCGGGGCGTTTGAATATTTCCCCAAGCCTTTCGACATTGACGAACTGGTGCGCACCGTGCGTCAGGCGGCGGGCTCGCAGGGCTCTTCGCTGAGCGGGGGCGTGGACGAGGGGCCGGGGCAGGGCTTGCCGCTGGTCGGGCGTTCGGCCTCGATGCAGGCGGTGTACCGGATGATCACGCGCGTGCTGCGCAATGATCTGACCGTGCTGATTTTGGGCGAGAGCGGGACGGGCAAGGAACTGGTGGCCGAGGCGATCCATCAGTTAGGGCATCGGCAGAAGGGGCCTTTCGTGGCGGTCAATACGGCGGCCATTCCCGCTGACCTGATCGAGAGCGAATTGTTCGGCCATGAAAAGGGCGCCTTTACCGGCGCCGTCGCCCGTCATATCGGCAAGTTCGAGCAGGCGGCGGGGGGCACTTTGTTCCTCGACGAAATCGGCGATATGCCGATGCAGGCCCAGACCCGCCTGCTGCGCGCGCTGCAATCGGGCAGCATCCGTCGCGTGGGCGGGCGCGACGAGGTGAGCATCGACACGCGCATCGTGGCGGCCACCAACAAGGATCTGGAGCCGATGATCGCGGCGGGGCAATTCCGCGAGGATCTCTATTACCGGCTGAACGTCGTGCCGATCCACCTGCCGCCTTTGCGCGAAAGGGCGGATGATATTGCGGCGCTGGCGCGGCATTTCCTCGCGCTGGCGGCCACGGAGGGCCTGCCCCGGCGGCGTCTGGCGCCCGAGGCCGAGGCGATGCTGATGCGCCAGCCATGGCGGGGCAATGTGCGCGAGCTTCGCAATTTCATCTATCGTCTGGCGCTGCTGGCGCGCGAGGATGTGATTGATGCTGCTGCGCTGGAGCCGATGCTGGCCTCCGCCGCGCGGGCCGAGGAGCAGATCGAGGCCCCGCTCGATCTGAACGGCGCGGTCGAACGCTGGCTGAGCGAGCATAATCCGCCCTCCGGCACTGTCTATGACGCGGCACTGGCGGCGTTTGAAAGGCCGTTGTTCAACCGCATTCTGGCCGCAACCGGGGGCAACCAATTGCGGGCGGCGCAAATGCTGGGGATCAACCGCAACACGTTGCGCAAACGCCTGGGCGAACTGGCGATAGACCCCGATTCCTTCCTGCGACGACCTTAG
PROTEIN sequence
Length: 472
MSILLVEDDESIAIVITAALEAEGFSVVRCDSIVERDRLLATREFSALVTDVMLTDGDGIETLGRVREIHPDLPVIVLSAQNTLDTAVRASDTGAFEYFPKPFDIDELVRTVRQAAGSQGSSLSGGVDEGPGQGLPLVGRSASMQAVYRMITRVLRNDLTVLILGESGTGKELVAEAIHQLGHRQKGPFVAVNTAAIPADLIESELFGHEKGAFTGAVARHIGKFEQAAGGTLFLDEIGDMPMQAQTRLLRALQSGSIRRVGGRDEVSIDTRIVAATNKDLEPMIAAGQFREDLYYRLNVVPIHLPPLRERADDIAALARHFLALAATEGLPRRRLAPEAEAMLMRQPWRGNVRELRNFIYRLALLAREDVIDAAALEPMLASAARAEEQIEAPLDLNGAVERWLSEHNPPSGTVYDAALAAFERPLFNRILAATGGNQLRAAQMLGINRNTLRKRLGELAIDPDSFLRRP*