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scnpilot_p_inoc_scaffold_118_16

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(19458..21224)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter n=1 Tax=Sphingomonas elodea RepID=UPI000263058C similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 573.0
  • Bit_score: 955
  • Evalue 3.40e-275
  • rbh
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:GAO55174.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 584.0
  • Bit_score: 995
  • Evalue 4.20e-287
general substrate transporter similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 575.0
  • Bit_score: 939
  • Evalue 5.50e-271

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1767
ATGTCTGTATTGCATGAAACGGCAGAGGATCTAGCCAGACTGCCAAAGCATCATGTCGCCACCCATGACGAGAAACTGGTGATTACCGCCAGCTCGCTGGGCACGGTTTTCGAATGGTATGATTTCTATCTCTACGGCCTGCTGACCGCGATCATCGCGGCCCAGTTCCTGACCGGCCTCAATCAGACCACGTCCTTTATCATGGCGCTGCTGGTGTTCGCGGCAGGCTTTATCGTGCGCCCGTTCGGGGCGCTGGTGTTTGGCCATATCGGCGATCTGTTCGGGCGCCGCTATACTTTCATCATCACGCTCACGGTGATGGGCCTGTCGACCTTCCTCGTCGGCTGTCTGCCCACCTATAAGCAGGTTGGCGTGGCGGCGCCCATCATGCTGGTGGTGCTGCGCATGTTTCAGGGGCTGGCGCTGGGCGGCGAATATGGGGGCGCGGCCACCTATGTTGCCGAACATGCGCCTGCCGGAAAGCGCGGGCTTTACACGAGCTGGATCCAGATCACGGCCACTGCCGGTCTTGCCATGGCGCTGCTGATCGTCATCACCGTGCGCTCGCCTGTGACGGGCGTGGGCGAGGAAGCCTTCAAGCAATGGGGCTGGCGCATTCCCTATCTGATCTCGGGCCTGTTCCTGGTGCTGGGCCTGTGGCTGCGCCTGAAGCTGCATGAAAGCCCGGTGTTCCAGAAGATCAAGTCGGAAGGCAGCGGCTCGAAGGCTCCGCTCAAGGACGCATTCGGCAAGTGGTCGAACCTCAAGATCGTGCTGATCGCTTTCTTCGGCGCCATCGCGGGTCAGGCTGTCGTCTGGTACACGGGCCAGCTCTATGCGATGTATTTCCTTGAAAAAATGCTCAAGGTTGACGGCCTGACCGCCAACACGCTGATCATTACCGCGCTGTTGCTGGCCACGCCTTTCTTCCTGATCTTCGGCATGCTTTCGGACAAGATCGGCCGCAAGCCCATCATCCTGACCGGCTGCGCGCTGGCCGCTCTCACCATGTTCCCCGTGTTCCATGCGCTGACCGAGGCGGCCAATCCGGCTCTGGCCCATGCGCAGGCCAATGCCCCGGTCAAGGTCATGGCCTATCCGGGCGAATGTTCCTCGCAATTCGACCCTGTGGGCGCCAACAAGTTTGACGCCACCAGCTGCGATATCGTGAAGAACGCTCTGGCCAAGGCGGCGATCAATTACGAAAACGTGGCCGCGCCTTCGGGTTCGGTGGCCAGCGTTTCGATTGGCGGCAAGACCATCATCGCCCCCGATCCTGCCCAGATTTCGGGCGAGGACAAGAAGAAGGCGATTGCCGACTTCACCACCGCGCTGGTCGGCAAACCGGCAACGCCCGCCAAGGCGGCCGAGGGCGGCAAGCCTGCGGTCGAAGCCAAGCCTGCGGTTGTGGGTGAACTGACCAAGGTGGGCTATCCCACCAAGGCCGACCCGGACCAGATCGACAAGCCCAAGGTGGTGGCGATCCTGTTCTATCTCGTCCTGCTGGTCACCATGGTCTATGGCCCGATCGCGGCCATGCTGGTCGAACTCTTCCCCAGCCGGATCCGCTACTCGTCCATGTCGCTGCCCTATCATATCGGCAATGGCTGGCTGGGCGGTCTGCTGCCTGCCATCGGCTTTGCCATGGTCGCGGCCAATGGGGATATCTACTATGGCTTCTGGTATCCGGTGATCGTGGCGGCGGCCACCTTCTTCTTTGGCCTGTTCTTCCTGCCCGAGACTTTCCGCCGCATCATCGATGAATAA
PROTEIN sequence
Length: 589
MSVLHETAEDLARLPKHHVATHDEKLVITASSLGTVFEWYDFYLYGLLTAIIAAQFLTGLNQTTSFIMALLVFAAGFIVRPFGALVFGHIGDLFGRRYTFIITLTVMGLSTFLVGCLPTYKQVGVAAPIMLVVLRMFQGLALGGEYGGAATYVAEHAPAGKRGLYTSWIQITATAGLAMALLIVITVRSPVTGVGEEAFKQWGWRIPYLISGLFLVLGLWLRLKLHESPVFQKIKSEGSGSKAPLKDAFGKWSNLKIVLIAFFGAIAGQAVVWYTGQLYAMYFLEKMLKVDGLTANTLIITALLLATPFFLIFGMLSDKIGRKPIILTGCALAALTMFPVFHALTEAANPALAHAQANAPVKVMAYPGECSSQFDPVGANKFDATSCDIVKNALAKAAINYENVAAPSGSVASVSIGGKTIIAPDPAQISGEDKKKAIADFTTALVGKPATPAKAAEGGKPAVEAKPAVVGELTKVGYPTKADPDQIDKPKVVAILFYLVLLVTMVYGPIAAMLVELFPSRIRYSSMSLPYHIGNGWLGGLLPAIGFAMVAANGDIYYGFWYPVIVAAATFFFGLFFLPETFRRIIDE*