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scnpilot_p_inoc_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 180 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_118_1
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198..2018
DNA (1821bp) protein (607aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
N-6 DNA methylase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8D0_9SPHN rbh
N-6 DNA methylase {ECO:0000313|EMBL:EGD59095.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium ni
scnpilot_p_inoc_scaffold_118_2
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2015..3370
DNA (1356bp) protein (452aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] Tax=GWD2_Desulfuromonadales_61_12_curated
type I restriction-modification protein subunit S n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A5ECBC rbh
restriction modification system DNA specificity domain protein
scnpilot_p_inoc_scaffold_118_3
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3367..4296
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8C8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD59097.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_118_4
unknown

Not on your lists

4324..5106
DNA (783bp) protein (261aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_118_5
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5117..8212
DNA (3096bp) protein (1032aa)
Type I site-specific restriction-modification system, R (restriction) subunit and related helicase (EC:3.1.21.3)
Type I site-specific restriction-modification system, R subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8C6_9SPHN rbh
Type I site-specific restriction-modification system, R subunit {ECO:0000313|EMBL:EGD59099.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
scnpilot_p_inoc_scaffold_118_6
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8196..9053
DNA (858bp) protein (286aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
scnpilot_p_inoc_scaffold_118_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9141..9320
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:AHE57322.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_p_inoc_scaffold_118_8
unknown

Not on your lists

9513..10100
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_118_9
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10090..11631
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00035F2985 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
hypothetical protein
scnpilot_p_inoc_scaffold_118_10
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11740..12372
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB93_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ61452.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_118_11
unknown

Not on your lists

comp(12683..12988)
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_118_12
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13242..15674)
DNA (2433bp) protein (811aa)
TonB-dependent receptor n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C380_9SPHN rbh
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34444.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
TonB-dependent receptor
scnpilot_p_inoc_scaffold_118_13
unknown

Not on your lists

16203..16874
DNA (672bp) protein (224aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_118_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16885..18774)
DNA (1890bp) protein (630aa)
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:GAO55175.1}; EC=6.2.1.1 {ECO:0000313|EMBL:GAO55175.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
AMP-dependent synthetase and ligase n=2 Tax=Novosphingobium nitrogenifigens RepID=F1ZCN9_9SPHN rbh
AMP-dependent synthetase/ligase
scnpilot_p_inoc_scaffold_118_15
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18816..19337)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWH8_9SPHN
GCN5 family acetyltransferase {ECO:0000313|EMBL:KHK92579.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
GCN5-like N-acetyltransferase
scnpilot_p_inoc_scaffold_118_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19458..21224)
DNA (1767bp) protein (589aa)
major facilitator transporter n=1 Tax=Sphingomonas elodea RepID=UPI000263058C rbh
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:GAO55174.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
general substrate transporter
scnpilot_p_inoc_scaffold_118_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21274..22746)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGH4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82778.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
scnpilot_p_inoc_scaffold_118_18
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22994..24943
DNA (1950bp) protein (650aa)
Acetyl-coenzyme A synthetase {ECO:0000255|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000255|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000255|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000255|HAMAP-R
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ACSA_NOVAD rbh
scnpilot_p_inoc_scaffold_118_19
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25034..25750
DNA (717bp) protein (239aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G511_NOVAD
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:KHS42691.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
two component LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_118_20
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26009..29431)
DNA (3423bp) protein (1141aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F196_SPHCR rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:KEQ52068.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphi
multi-sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_118_21
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29507..30583)
DNA (1077bp) protein (359aa)
Group 1 glycosyl transferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWN3_9SPHN rbh
Group 1 glycosyl transferase {ECO:0000313|EMBL:EJU12453.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon
GDP-mannose-dependent alpha-mannosyltransferase
scnpilot_p_inoc_scaffold_118_22
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30580..31554)
DNA (975bp) protein (325aa)
Metallophosphoesterase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VI19_9SPHN rbh
Metallophosphoesterase {ECO:0000313|EMBL:EJU12452.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
phosphoesterase
scnpilot_p_inoc_scaffold_118_23
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31649..33166)
DNA (1518bp) protein (506aa)
Putative exopolyphosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y341_9SPHN rbh
Putative exopolyphosphatase {ECO:0000313|EMBL:GAD47346.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
exopolyphosphatase
scnpilot_p_inoc_scaffold_118_24
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33178..35379)
DNA (2202bp) protein (734aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJ36_9SPHN rbh
scnpilot_p_inoc_scaffold_118_25
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35477..35947)
DNA (471bp) protein (157aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
7-cyano-7-deazaguanine reductase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0668
7-cyano-7-deazaguanine reductase
scnpilot_p_inoc_scaffold_118_26
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36126..37649
DNA (1524bp) protein (508aa)
Similar to uniprot|P37370 Saccharomyces cerevisiae YLR337c VRP1 n=1 Tax=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) RepID=Q6FTP1_CANGA
Basic proline-rich protein {ECO:0000313|EMBL:EWM68858.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
Fe-S oxidoreductase
scnpilot_p_inoc_scaffold_118_27
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37796..38671
DNA (876bp) protein (292aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZD98_9SPHN rbh
3-mercaptopyruvate sulfurtransferase {ECO:0000313|EMBL:EGD57461.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
scnpilot_p_inoc_scaffold_118_28
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38765..40000
DNA (1236bp) protein (412aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:ABD26990.1}; EC=4.4.1.8 {ECO:0000313|EMBL:ABD26990.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G583_NOVAD rbh
scnpilot_p_inoc_scaffold_118_29
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40256..41512)
DNA (1257bp) protein (419aa)
MFS transporter n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B45955 rbh
MFS transporter {ECO:0000313|EMBL:ETI64684.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_118_30
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41638..42279
DNA (642bp) protein (214aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB21
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AJP73477.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
Displaying items 1-30 of 180 in total

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