ggKbase home page

scnpilot_p_inoc_scaffold_118_30

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 41638..42279

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB21 similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 196.0
  • Bit_score: 245
  • Evalue 3.70e-62
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 196.0
  • Bit_score: 245
  • Evalue 1.00e-62
TetR family transcriptional regulator {ECO:0000313|EMBL:AJP73477.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 196.0
  • Bit_score: 245
  • Evalue 5.20e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGTCTGATACGAAAAACACCCCGGCGCCCACCCCCGTTCCCGGCGCGAACAAGGTGCCCAAGACCGAACGCGGGCGGCGCACCTTGCGCGCGCTGCTCAATGCCGCGGCCGAGGAATTTGGCGAAAAGGGCTTTCACGACGCCGCCATCAGCCAGATCACCGCGCGCGCAGGCGTGGCCACGGGCAGCTTTTACGTCTATTTCGACAGCAAGGAAGCGATTTTTCAGGCCCTTGTGCGCGATCTTTCGGGGCAGGTGAAGGATTTCGTCGCCCCGCGCATTGCCGCCGCCCCGGACCAGATCGCCGCCGAACAGGCAGGCCAACTCGCCTATCTGGAATTCGTACGCCAGCATAAAGAGATCTATCGCATCATCGACGAATCCGAATTCGTCGATCCGGCCGCCTACCGCGAACATTACACCAAATCGGCCACCCGCATCGCCTCCCGCCTGCAATCGGCGATGGAGCGCGGCGAGATCAGCGATGGCGATTGCGAGGTGCGGGCTTGGGCGCTGATGGGCATCAACGTGTTCCTCGGCCTGCGCTACGGCGTGTGGGGCGATGAGGCGCCCGAGGATGTCGTGCGCGAGGCGGGGCGCTTCATCACCGAGGGCCTCGCGCGGCGGGAGGAAAAGCCATGA
PROTEIN sequence
Length: 214
MSDTKNTPAPTPVPGANKVPKTERGRRTLRALLNAAAEEFGEKGFHDAAISQITARAGVATGSFYVYFDSKEAIFQALVRDLSGQVKDFVAPRIAAAPDQIAAEQAGQLAYLEFVRQHKEIYRIIDESEFVDPAAYREHYTKSATRIASRLQSAMERGEISDGDCEVRAWALMGINVFLGLRYGVWGDEAPEDVVREAGRFITEGLARREEKP*