ggKbase home page

scnpilot_p_inoc_scaffold_118_32

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(43376..45691)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B45084 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 780.0
  • Bit_score: 1307
  • Evalue 0.0
  • rbh
ScaffoldA10, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29802.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 794.0
  • Bit_score: 967
  • Evalue 1.20e-278
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 792.0
  • Bit_score: 957
  • Evalue 2.50e-276

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2316
ATGGCCCTGAACGCCCGCAAGAGCATCCGTCCGTCCGCCGTCCTTTTGATGGCCAGCGTGGCCATCGGCGCACTGCCCGCACCCGCTATGGCCCAGCAAGGCGCGAGCAATGGCGACATCATCGTTACCGCCCGCCGCCGCAACGAATCGCTCAACAACGTGCCGATCACCATGACCGCGCTGACCGGCGACCAATTGGCCGCCAAGGGTTTTGCGGACATCACCTCGCTGGCCGATGAAGTGCCCAACGTGACGCTGGAGCCTTCGCGCGGGACCAATTCGACGCTCTCGGCCTTCATCCGCGGCGTGGGCCAGCAGGATCCCGTTTCGGGCTTTGAACAGGGCGTGGGCATCTATCTCGATGACGTCTATCTCAACCGCCCGCAGGCCGCCGTGCTGGACATTTACGATGTCGAACGCGTCGAAGTGCTGCGTGGGCCGCAGGGCACGCTTTATGGCCGCAACACCATCGGCGGCGCGATCAAATATGTGACGAAAAAGATCGACGACAAGTTCCATCTGGGCCTGCGCGGCACCTATGGCAGCTATGACCAAGCCGATGGCGTCGCCACGATCAGCAGCCCGATCACCAAGGACGGATTGATCCGCGCCAGCGGCACTTTGGCCCGGCTGACGCGCGGCGGTTTCGGGCGCAATCTGACCACGGGCCTGTCGAATTATAACAAGGACATCTGGGCCGGACGCGGCACGATCGAGGTGCATGGCGACAAGATCTTCGCGCGCCTGACCGGTGATTACACCCATGACATGTCGAACCCGCGCGGCGGCCACCGCGAGATTCCGGGCCAGTACAGCGGCGCCCCGGTGCTGGCCAATGTGTTCGATACGCAGGCGGGGCTCAACAGCCCTAAGCAGGACGTGAAGGCATGGGGCTGGTCGCTCTTCCTTGAGGCCAAGCCGACCGAGGCGCTGACGCTGCGTTCGATCACTGCCTTCCGCAAGGACGATTCGGCCTCGCCCATCGACTTTGACGCCACTGCCTCGCAGGACGTCGACGTGCCTGCCTATTACCGCAACAAGCAGTGGAGTCAGGAGCTTCAGGTGCTTTACAGCAAGGGGCGGTTCAACGGCATGGCGGGTTTCTATTACCTCTATGCCACGGCGCTGACGCAGTTTGACGTGCGCCTGTTCACCACGCTGCCCGGCTTTACCGCCTACACCGACGCCAATATCCGCACCGACACGATGGCCGGTTTCGTCAACATGTCCTATGACATCACCGACCAGATCAGCATCGAGGCGGGCGGGCGCTATACCTGGGACAAGCGCTATGCCCAGATCCTGCGTCAGAATTATCTGGGCGGCGGTTCGCCCACTTTCGGCGGGGCAGGCATCCCTGCGGGCGCGCCCAGCACCAATGTTCTGGGCAGCGCCAGTTACACCAAATTCACCCCGCGTGTGTCGCTCAACTGGCGGCCGGACCCGAACAACACGATCTATGCCAGCTTCAGCCAGGGCTTCAAGGGCGGCGGTTTTGACCCGCGCGGCGTGGGTGTGAACGCGCCCGCCGGGGTCAGCCAGAGCCAGTTCCTCAGCTTTCGCCCGGAAAAGGTGGACAGCTATGAAATCGGCCTGAAAACCCGCCTGTTCGATCGCAAGCTGGCGCTTAATCTGGCCGCGTTCCGCATGGACTACAAGGATGTGCAGATCCCCGGCTCGGTGGCCTGCACCACGATTGTTGTCATCAATGGCGTACCGACGCCCACTGCGACCTTCTGCGGCGTGGTGACCAATGCGGGCAAGGCGCGTATGCAGGGTGTGGAAGCCGAGGCGCGGCTGAAGCTGGGGGCGCTTTCGCTCAATGGCTCGCTGGGCTATATCGACGCCAAATATCTGCAATATATTACGCTGATCGCGGGCCAGCCCACCGATGTGGCCGCCAACCGCAAGGTGCAGAACACGCCCTCATGGACCGGCAACGCCTCGGCCACCTATGCGATTCCGGTGCCCGCCGGTTCGCTTGACCTGTCGGGCGGCGTCTCGTGGAAGAGCACGACCTATCAGTTCGAAATTCCCAATCCCTATCTCGACCAGCCTGCCTATGCGCTCTTCGACGCCAGCCTCGTCTATCGCGCGCCGGGCGGCCGCTGGACGCTGGGCGTCTATGGCAAGAACCTGGCCGACAAGCGCTACAAGACCTCGGGCTACACCTATGTCGCGGCCAATGCCACCACCGGGGTGCTGGGCTCTACCCCGAGCGGCGCGCTCATCCCCACGCTGGGCAAGGAAGGCGTGCTGACCACCTATTGGGGCAATCCGCGGCAGGTGTTTGCGACGGCTACGGTGAACTTCTAA
PROTEIN sequence
Length: 772
MALNARKSIRPSAVLLMASVAIGALPAPAMAQQGASNGDIIVTARRRNESLNNVPITMTALTGDQLAAKGFADITSLADEVPNVTLEPSRGTNSTLSAFIRGVGQQDPVSGFEQGVGIYLDDVYLNRPQAAVLDIYDVERVEVLRGPQGTLYGRNTIGGAIKYVTKKIDDKFHLGLRGTYGSYDQADGVATISSPITKDGLIRASGTLARLTRGGFGRNLTTGLSNYNKDIWAGRGTIEVHGDKIFARLTGDYTHDMSNPRGGHREIPGQYSGAPVLANVFDTQAGLNSPKQDVKAWGWSLFLEAKPTEALTLRSITAFRKDDSASPIDFDATASQDVDVPAYYRNKQWSQELQVLYSKGRFNGMAGFYYLYATALTQFDVRLFTTLPGFTAYTDANIRTDTMAGFVNMSYDITDQISIEAGGRYTWDKRYAQILRQNYLGGGSPTFGGAGIPAGAPSTNVLGSASYTKFTPRVSLNWRPDPNNTIYASFSQGFKGGGFDPRGVGVNAPAGVSQSQFLSFRPEKVDSYEIGLKTRLFDRKLALNLAAFRMDYKDVQIPGSVACTTIVVINGVPTPTATFCGVVTNAGKARMQGVEAEARLKLGALSLNGSLGYIDAKYLQYITLIAGQPTDVAANRKVQNTPSWTGNASATYAIPVPAGSLDLSGGVSWKSTTYQFEIPNPYLDQPAYALFDASLVYRAPGGRWTLGVYGKNLADKRYKTSGYTYVAANATTGVLGSTPSGALIPTLGKEGVLTTYWGNPRQVFATATVNF*