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scnpilot_p_inoc_scaffold_187_1

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(689..2815)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B650C7 similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 695.0
  • Bit_score: 1253
  • Evalue 0.0
  • rbh
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK65761.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 709.0
  • Bit_score: 1101
  • Evalue 0.0
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 709.0
  • Bit_score: 1101
  • Evalue 0.0

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2127
ATGATGCGTAAATTGGTCCGGTCGCTGTTGGCCTGCACGATGCTGACCGGCGCAGCCGCTTGTTCCGGCGCCTCTGCGCGGGAAGCCGATCCAACCGAGGATGCTGGGCATTCCGATGCCGAGATCATCGTCACCGGCCTGAAGCCCGACGAGGGCCAGAACAAAGTCAGCCAAGGCGGCGCTCTGGGCGCAAAAGCCTTGCTGGATACACCCTATTCGGTGACAGTCATCGACGCCGAGGATATCGCCCGACGTCAGGCCAACAGCATCGCGCAGATCTTCGCCAATGATCCGTCTGTCTTTTCCTCCGCCCCGTCCGGTTCGACAAACTGGTGGGGCACCCAGATCCGGGGACTGGGCGTGCGCAACTATTATATCGATGATGTGCCGCTGCTGCTCTACTGGGGCGGCGATTTCCCGCTTGAGCCGATTGAAAGCGTCACCGCCCTAAAGGGCCTGACCGGCTTCATGTACGGCTTCGGAGCGCCAGGCGGTGTGATCAGCTACCGCAGCAAGCGGCCGACCGCCGAACCGATGTTGACGACCGAGATCGGCTATCGCACCAACAGCGTCTTCTATGTTCGGGCCGATGCTGGCGGGCCGCTGACCCAAGATGGCAGGCTGGGCTATCGGGTCAATCTGGCGGGAGAAAAGGGCACCGCCTATAATCAGTCCGGGGTCAACCGGCTGGTTGGGTCACTGGCGCTCGAATATACATTCGGCCCCGACCTCAAATGGTATGCCACCGCTACCTATGAAGACAGCAATCTTCGACACGAGCCGTTCCAGTTCTACTGGGCAAATTATGTCGGGGCCGCCTTGCCCCGCCCGACCTATGACTATGGCAATCTCAATGTCGCGAATAGCTATTACAAGGGACGGACGCTGGCCACGGCCACCGGGCTGGACTGGACCTTTGCTGATGGTTGGTCTGCTCGCCTGACCTATGGTTACACCAGCAAGTTTCACCGCTCGAACAAGATGTTCGTCTACATGCGCAACCAAGCCGGCAACTATGACGGCTATGCCTATAATTTCGCCGAACTGGACAAGAATCATTTCATTCAAGCGATGATGCAAGGTGAACTCGCAACTGGCCCGATCCGGCATGAGATCGTGGCAGGGGCGTCGTACCAGATCACGGATAGCGCCTTCGGCTATAACGATAAGGACTATTATTGGGGCAATGATTTTGACGGCAATATCTATCAGTATCAGCCTTTTCGCGTGACGCGCGCAATCAGCTTCGGAACCAATGGCTGGCCGAGCAGGGAAAGGCAGACAGCTATGTTCCTGAGCGACACCCTACACCTTGGTAAACATCTGCAAGCCATGGTCGGCGCGCGCTATACGCAATACAAACTGTTCGATCTCGACGGGAATGCGTCGGTGGACTCCGGCTATCGTACCTCGACGGTGACGCCCACGCTCGCGCTGATCTACAAACCTCAGCCTTATGTCTCGATCTATGGCAGCTATGTCGAGGCGATGGAGCCGGGCAGCCGGGTTGGCGGTGAGTATGCCAATGTAGGTGAGGTGCTGAAGGCGACGCTCAGCCGCCAATATGAAATCGGCGCAAAATATGAACATCAGCGGCTGAGCCTGACCCTGGCGGGCTTCCGCATTGAGCGCGCCGCAACGATCGATCAGGTCGTCGATGGCGCGCGACGTCTGACGCAGGATGGCCTGACGCTTTACAAGGGAGTCGAGGCGATTGGAAGATATCGGCTCAGCGATGATCTGAAGCTGGGGGCCGGAGTAATCTATCTCGATCCGAGCATACGCAACGTATCGGCCAGTAACGAGGATTTGCGCGGCAATATCCCGGCGGGCGCGGCGAAATGGCAACTCACCGGCAATGCCGAATATCATTTGCCGGCCATTCCCGGCCTCAGTTTGCACGGCAATGTCCGCCATACCGGCAAGTCGCCAACCAGCGACAGCAATAGCCTCTTTGTTCCAGCCTATACCACGGCCAATGCGGGCTTTCAGTTGGACACGCTGGTCAGTGGGCGCAAGGTGACCTTCACTGGCAACGTCAATAATCTGTTCAATGCGAAATACTGGACCCAAACCAATATTGGGGAGGGAATAAACGCTGCCCTGAGCGTCCGCCTATCTTGGTAA
PROTEIN sequence
Length: 709
MMRKLVRSLLACTMLTGAAACSGASAREADPTEDAGHSDAEIIVTGLKPDEGQNKVSQGGALGAKALLDTPYSVTVIDAEDIARRQANSIAQIFANDPSVFSSAPSGSTNWWGTQIRGLGVRNYYIDDVPLLLYWGGDFPLEPIESVTALKGLTGFMYGFGAPGGVISYRSKRPTAEPMLTTEIGYRTNSVFYVRADAGGPLTQDGRLGYRVNLAGEKGTAYNQSGVNRLVGSLALEYTFGPDLKWYATATYEDSNLRHEPFQFYWANYVGAALPRPTYDYGNLNVANSYYKGRTLATATGLDWTFADGWSARLTYGYTSKFHRSNKMFVYMRNQAGNYDGYAYNFAELDKNHFIQAMMQGELATGPIRHEIVAGASYQITDSAFGYNDKDYYWGNDFDGNIYQYQPFRVTRAISFGTNGWPSRERQTAMFLSDTLHLGKHLQAMVGARYTQYKLFDLDGNASVDSGYRTSTVTPTLALIYKPQPYVSIYGSYVEAMEPGSRVGGEYANVGEVLKATLSRQYEIGAKYEHQRLSLTLAGFRIERAATIDQVVDGARRLTQDGLTLYKGVEAIGRYRLSDDLKLGAGVIYLDPSIRNVSASNEDLRGNIPAGAAKWQLTGNAEYHLPAIPGLSLHGNVRHTGKSPTSDSNSLFVPAYTTANAGFQLDTLVSGRKVTFTGNVNNLFNAKYWTQTNIGEGINAALSVRLSW*