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scnpilot_p_inoc_scaffold_187_30

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(33978..34514)

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKF1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 178.0
  • Bit_score: 293
  • Evalue 1.70e-76
Biopolymer transport protein ExbD {ECO:0000313|EMBL:GAD49030.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 178.0
  • Bit_score: 293
  • Evalue 2.40e-76
biopolymer transport ExbD protein similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 164.0
  • Bit_score: 272
  • Evalue 6.70e-71

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGGCAATGTCTGTTGGCGGCGCGGGCGGCGAAGAAAAGCCGATGTCCGACATCAACACCACCCCTCTGGTGGACGTGATGCTGGTGCTGCTGATCATCTTCCTGATCGCGGTTCCGGTCGCGATCCAGACGATCCAGAAGCTGAAGATCCCTGTGATGGTTTCGCAGGAATCCAAGGATAAGGTCGAAAACCTGCTGATCACGGTCAGCACCACCGACGCTGCCGGTCGCAGCGCCGGCGACCCCGGCTTCGAAGGCGCGTCGCGTGGTGGCGAATGCCGCATCTACTTCAACAACATCACCCCCGTTGACTCGACTGAACTGTACGACCAGGCGTTCAAGCGCCTTGACGACATCATCAAGCGCGAGGGCGGTGCAGAGGTTCTGCGCGATAACCCCGAAAAGGTGCCGCAGGTTCACGTTCGTGCCGACGTCGAAGCGCCCTGGCGCTGCGTCGCGGGTGCGATCTTCAACGTGCAGCGCGCGGGCTATCCCACGGTTGGCTTCATCTCGAACCCGGTCGATCCGAACGGCTGA
PROTEIN sequence
Length: 179
MAMSVGGAGGEEKPMSDINTTPLVDVMLVLLIIFLIAVPVAIQTIQKLKIPVMVSQESKDKVENLLITVSTTDAAGRSAGDPGFEGASRGGECRIYFNNITPVDSTELYDQAFKRLDDIIKREGGAEVLRDNPEKVPQVHVRADVEAPWRCVAGAIFNVQRAGYPTVGFISNPVDPNG*