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scnpilot_p_inoc_scaffold_187_37

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(41205..42149)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZR22_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 318.0
  • Bit_score: 335
  • Evalue 5.20e-89
  • rbh
Scaffold14, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31123.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 314.0
  • Bit_score: 346
  • Evalue 4.20e-92
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 313.0
  • Bit_score: 330
  • Evalue 4.80e-88

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGCTCAAGCCAACCAAACCGGCCCTTGATGCAGCGGTGACACCGCTGGTCGGCCGGTCAAGCAAGGGCCAACCGCTGTCCTATAATCGGGCGCCCGCGCCCGATCTGGCGCCGTGGCTGGGGCGGATCTATGTCACGCCGGTCAATCTGCCGCCTGATTACTGCCTGTCTTCTGGCATCTTCAACGACAGTTCGATGGTGCGTATTCAACTGGGCGGCAAATGGACCGCCCATACCGCCGACGGTGTCCACCATCTTGGCCGCGCCGCGCTGATTTTTGGCCCGCAAAGCAAGATCATGCCCATCACCGTCGAGGGCAGCTTTCTGTCCATCGGCTATGCGCTGAAGGCGGGGGCGGGCTATGCGCTCTTTGGCCGCAGCGCGCATGAGATGGTCAACCGGCTGGTCCCGCTCGAACATTACGGACTCAACAGCGAAGAAACGCTGGCCGCCTTCAGCCATACCGAGGACCCTGTGGCGATCGCCGATCTGCTGGAGCGCCGCTTCCGGCTGCTGGTGGAAAAGCTGGGCCGTCCGTATCCCAATCCGATCAGCACCGCCTTTGAGGCGCTGACCTTTGCCAATCCCAATGCCAGCATCAGCGATTTCGCCGCCGAAATGGCGATCAGTACGCGACAGTTGGAGCGGATTGTGCGGCGCGATTTCGGTATGCCGCCCAAGCAGGTGATGCGCCGCGCCCGCGCGCTGGACATGGCCAGCCATCTGCACGGCGTGGCGGACGAGGCCGAGGCCGAGGAACTGATCCTGCGCTATTTCGATCAGGCGCAGATGACGCGCGAATTTACCGAATTGTTCGGCGTGACCCCGCGCCGCTTTGTGCGCACGCCCAATCCGCTGCTGACGCTGGCGCTGGAATCGCGGCAGGCCAAAAGGCTGGAGGCGCTGGAACGCGTGCCGCCGGGGGGCAACCGCCCCTGGCAATAA
PROTEIN sequence
Length: 315
MLKPTKPALDAAVTPLVGRSSKGQPLSYNRAPAPDLAPWLGRIYVTPVNLPPDYCLSSGIFNDSSMVRIQLGGKWTAHTADGVHHLGRAALIFGPQSKIMPITVEGSFLSIGYALKAGAGYALFGRSAHEMVNRLVPLEHYGLNSEETLAAFSHTEDPVAIADLLERRFRLLVEKLGRPYPNPISTAFEALTFANPNASISDFAAEMAISTRQLERIVRRDFGMPPKQVMRRARALDMASHLHGVADEAEAEELILRYFDQAQMTREFTELFGVTPRRFVRTPNPLLTLALESRQAKRLEALERVPPGGNRPWQ*