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scnpilot_p_inoc_scaffold_187_46

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 50004..51548

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 3 n=2 Tax=Novosphingobium RepID=F6IJP2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 510.0
  • Bit_score: 882
  • Evalue 1.90e-253
  • rbh
prfC; peptide chain release factor 3 similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 510.0
  • Bit_score: 882
  • Evalue 5.30e-254
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1088721 species="Bacteria; Proteobacteria; Alphapr similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 510.0
  • Bit_score: 882
  • Evalue 2.60e-253

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Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1545
ATGACTGACGCCTTTGCCACCCGCCGCACCTTTGCCATCATCTCGCACCCTGACGCGGGCAAGACCACGCTGACCGAAAAGCTGTTGCTGAACGGCGGCGCGATTCACTTGGCGGGCGAGGTGAAGGCGCGCGGCGCGGCGCGGCGTGCCCGGTCTGACTGGATGAAGATCGAACAGCAGCGCGGGATTTCGGTGACCTCCTCGGTCATGACCTTTGCCCGCGAGTTTGAAGGGCTGGGGCATATCACCTTCAACCTGCTCGACACGCCGGGCCACGAGGATTTTTCCGAGGATACCTATCGCACGCTGACGGCGGTCGATTCGGCGATCATGGTGATCGATGCGGCCAAGGGTATCGAGCCGCAGACGCGCAAGCTGTTTGAAGTGTGCCGGATGCGCAATGTGCCGATCATCACCTTCGTCAACAAGGTGGACCGCGAAGGCCGCCCGGTGTTCGAGATTCTGGACGAGGTGGCCGATGCGCTGGCGCTGGACGTTTCGCCGCAAAGCTGGCCCGTCGGCATGGGCGGCACGTTTGAGGGCATCCTTGACCTGAACAGCGGGCGTATCAGCCGCCCCGAGGGCGACAGCCGCGAATTTCTGGGCAAGGTCGATCATGAGCCGGTGCCGGAGGAATTTGCCGAGGAGATCGAGCTGGGTCAGGCGGGCTATCCCGAATTTAATCTTGAGGCCTATCGGCATGGCGATCTGACGCCGGTGTTCTTTGGCTCGGCGCTGAAGAATTTCGGTGTGGCCGAATTGATCGAGGCCATCGCCCGCATCGCGCCCCCTCCGCGCCCGCAGCCCAGCGAAGCGGGTGTGATCGATCCGTCGGGCAATGAGGTGACGGGCTTCATTTTCAAGGTGCAGGCCAATATGGACCCGATGCACCGCGACCGCATCGCTTTCATGCGTCTGGTTTCGGGCACATTCAAGCGCGGGATGAAGCTGACGCCATCCGCGTTGGGCAAGCCGATTGCGGTGCATTCGCCGATCCTGTTCTTTGCGCAGGACCGCGAGATTGCCGATGAGGCCCAGCCCGGCGATATCATCGGCATTCCCAACCATGGCACTTTGCGCGTGGGCGATACTTTGTCGGAAACGAACAAGGTGCGCTTTACCGGCCTGCCCAATTTCGCGCCGGAAATCCTGCGCCGCGTTCAGCTCAAGGACCCGACCAAGACCAAGCAACTCCGCAAGGCTCTCGATGATCTGAGCGAAGAGGGCGTGATTCAGGTCTTCTATCCCGAAATCGGTGGCCAGTGGATCGTGGGCGTGGTGGGCCAGCTTCAGCTCGACGTGCTGATTTCGCGACTGGAGGCTGAATATAAGGTAGGCGCCATGCTGGAGCCCGCGCCTTTCGATACGGCGCGCTGGGTGAAGGGCGATGCCAAGGCGCTGTCCGACTTTGCCGAATTCAACCGCGCCAATCTGGCCAAGGACCGCGATGGTGATCCGGTGTTCATGGCGCGATCGTCGTGGGATGTGTCCTATCAGCAGGAGCGCAACCCCGAGCTGACCTTTTCCGCGACCAAGGAGCGGTAA
PROTEIN sequence
Length: 515
MTDAFATRRTFAIISHPDAGKTTLTEKLLLNGGAIHLAGEVKARGAARRARSDWMKIEQQRGISVTSSVMTFAREFEGLGHITFNLLDTPGHEDFSEDTYRTLTAVDSAIMVIDAAKGIEPQTRKLFEVCRMRNVPIITFVNKVDREGRPVFEILDEVADALALDVSPQSWPVGMGGTFEGILDLNSGRISRPEGDSREFLGKVDHEPVPEEFAEEIELGQAGYPEFNLEAYRHGDLTPVFFGSALKNFGVAELIEAIARIAPPPRPQPSEAGVIDPSGNEVTGFIFKVQANMDPMHRDRIAFMRLVSGTFKRGMKLTPSALGKPIAVHSPILFFAQDREIADEAQPGDIIGIPNHGTLRVGDTLSETNKVRFTGLPNFAPEILRRVQLKDPTKTKQLRKALDDLSEEGVIQVFYPEIGGQWIVGVVGQLQLDVLISRLEAEYKVGAMLEPAPFDTARWVKGDAKALSDFAEFNRANLAKDRDGDPVFMARSSWDVSYQQERNPELTFSATKER*