ggKbase home page

scnpilot_p_inoc_scaffold_187_50

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 54559..55323

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3J6_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 267.0
  • Bit_score: 414
  • Evalue 9.40e-113
  • rbh
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABD27577.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 268.0
  • Bit_score: 417
  • Evalue 1.20e-113
cold-shock DNA-binding protein family protein similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 267.0
  • Bit_score: 414
  • Evalue 2.60e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGGGTTTTGATAGAGGGCGTCGCGGCAGGGGCCGAGACAAGCGCGACGGGTTCGGCGAAGAAGGTTTCGATCCCTTCATGGGCGGTGGCGACCGCTTTGGTGGTGGCGACCGTTTCGGCGGCGGTGACCGCTTTGGCGGCGGCCGTGATCGCGGCGGCTTCGGCGGCGGTGATCGTGGCGGCTTCGGCGGCGGCCCGCGTGGCGGCGGCTTTGGCGGCGGCGGTGGCGGCGGCTTCGGCGGCCCGCGCGGCGGCGGCGGTGGCGGCATGCCTGCCCAGGTCGTTGGCCAGGGCAAGGGCGTCGTGAAGTTCTTCAACGCTCAAAAGGGTTTTGGCTTCATCCAGCGTGAAGACGGCGGCGAAGATGTGTTCGTGCACATCAGCGCGGTCGAACGCGCCGGTCTTGAAGGTCTGGCCGAAGGTCAGGGTCTGGAATTCACGCTGGTGGATCGTGGCGGCAAGGTGTCGGCCAGCGATCTGTCGGTTGTGGGTGATGTGATCGCGGTCGCCAAGCGCGAACCCGCTGCTCCCCAGCGCCAGCTGACCGGTGAAAAGGCCACCGGCACGGTCAAGTTCTTCAACGCGATGAAGGGCTTCGGCTTCATCACGCGTGATGACGGCCAGCCCGATGCCTTCGTGCACATCAGCGCGGTCGAACGTTCGGGTCTTCGTGAAATCAACGAAGGCGACCGTCTGGAATTCGACATCGAAGTCGATCGACGAGGCAAGTACTCGGCGGTCAACCTCTCGCCGCGTCAGGGTTGA
PROTEIN sequence
Length: 255
MGFDRGRRGRGRDKRDGFGEEGFDPFMGGGDRFGGGDRFGGGDRFGGGRDRGGFGGGDRGGFGGGPRGGGFGGGGGGGFGGPRGGGGGGMPAQVVGQGKGVVKFFNAQKGFGFIQREDGGEDVFVHISAVERAGLEGLAEGQGLEFTLVDRGGKVSASDLSVVGDVIAVAKREPAAPQRQLTGEKATGTVKFFNAMKGFGFITRDDGQPDAFVHISAVERSGLREINEGDRLEFDIEVDRRGKYSAVNLSPRQG*