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scnpilot_p_inoc_scaffold_668_51

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 48490..48960

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z7R6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 156.0
  • Bit_score: 314
  • Evalue 4.80e-83
  • rbh
Conjugal transfer protein {ECO:0000313|EMBL:EGD59309.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 156.0
  • Bit_score: 314
  • Evalue 6.70e-83
type IV secretory pathway protease TraF-like protein similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 153.0
  • Bit_score: 184
  • Evalue 2.10e-44

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGGCACTGATCGGCGGCGCGGCGCTGGGCTGGTCTGCGCTCAAGGATTGGCACGACCACCACGCCTTCCTCATCAACGCCAGTGAGTCGCTCCCCAACTGGGCGCTGCTGGTCGAGACGGGGCGCTTCCCAGCGCGCGGCGATTATGTCGTTTTCGCTCCCGGTCATGACAGCCTCGTGGTGCGGCATTTCGGGGCCAACCCCAAGCCCTTCGCCAAGATCACCTATGGCGTGCCAGGCGATGTCGTCACCCGCATGGACGATGCCGTGCAGGTGAATGGCAAGACCGTCGCCCATTTGAAGCCCAAGACTCATCAGGGCGAGGATCTCGTACCCGGCCCCATCGGCACGATCCCACCAGGGTGCATCTATGCCGGAAGCCCGCATCAGGATGGGTTCGACAGCCGCTATGCCGCGATCGGCTTTGTCTGCCGCGACCGGTTGATCGGCATCGGGACGCCGATCCTGTGA
PROTEIN sequence
Length: 157
MALIGGAALGWSALKDWHDHHAFLINASESLPNWALLVETGRFPARGDYVVFAPGHDSLVVRHFGANPKPFAKITYGVPGDVVTRMDDAVQVNGKTVAHLKPKTHQGEDLVPGPIGTIPPGCIYAGSPHQDGFDSRYAAIGFVCRDRLIGIGTPIL*