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scnpilot_p_inoc_scaffold_668_52

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 48957..49604

Top 3 Functional Annotations

Value Algorithm Source
Type-F conjugative transfer system protein TraW n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8U7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 215.0
  • Bit_score: 403
  • Evalue 1.40e-109
  • rbh
Type-F conjugative transfer system protein TraW {ECO:0000313|EMBL:EGD59310.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 215.0
  • Bit_score: 401
  • Evalue 5.70e-109
Type-F conjugative transfer system protein TraW similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 205.0
  • Bit_score: 183
  • Evalue 4.90e-44

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGAGGCGCGCCGGTCCCGCCTCGATCCTGCTTGCGGTGCTGGGCATTGGCTCGGCGCCGATGATGGCGAGCGCCCGCGATTTCGGCACCTTCGGCCCGACCTGGTCGATTGCCGAGCCGGACCTTCTGGCCGCCATCAAGGCCCGGCTCGAAGCGGCAAGGCAGAACGGCAAGCTCGATGCGATGAACCAGCGCTTCGTCGAATCGGCCCAGGCCAGCGTGCGACGACCCCATGCCGTGGCGGGCATTACGCCTGCCAGCAGCGACCGGCGCTGGAGTTTCGATCCCAGCGTTACGCTCTCGCAGGACATTCGTGATGCGCGCGGGCATTTGATCGCAACGCAGGGCCAGCGTTTCAACCCGCTCACCCATCTCAATCTCGCCCACAGCTTCGCCTTCATCGATGGGGATAGCGCGGTGGAACGCGAGTGGGCCATGCACCAGGGCGCGCCGGACAAGCTCTGGATCGTGCTGGTCAAAGGTTCGCCGACCGATCTCATGAAAGCGACCCAGCGCCGCTTCTATTTCGATCAGATGGGCAGCCTGACGGGCAAGTTCGGCATAGCCCATACGCCCGCGCTGCTCGTCCAGCAGGGCGACCATCTCGACATCCGCGAAGTGGCGCTGCCAGTAGGAGAACGCCGATGA
PROTEIN sequence
Length: 216
VRRAGPASILLAVLGIGSAPMMASARDFGTFGPTWSIAEPDLLAAIKARLEAARQNGKLDAMNQRFVESAQASVRRPHAVAGITPASSDRRWSFDPSVTLSQDIRDARGHLIATQGQRFNPLTHLNLAHSFAFIDGDSAVEREWAMHQGAPDKLWIVLVKGSPTDLMKATQRRFYFDQMGSLTGKFGIAHTPALLVQQGDHLDIREVALPVGERR*