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scnpilot_p_inoc_scaffold_1288_10

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(7512..9923)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J660_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 803.0
  • Bit_score: 1243
  • Evalue 0.0
  • rbh
Type VI secretion protein {ECO:0000313|EMBL:EQB17429.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 803.0
  • Bit_score: 1243
  • Evalue 0.0
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 794.0
  • Bit_score: 1240
  • Evalue 0.0

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2412
ATGGCCAAACTTCCTGGTGCCCCTATGGCGGGCGCGGCCCGTTGGTTGCGTAAGGAAAGCGCCGCAGGTGAACGCTTGCCTTACTATCGTATGCTGGACGACAATGTCGTTTTGTTGCGCGATGGTTCGGTAATGCTATCATTGTTGGTTCCTGGCTTTTGCTTCGAAACGGCCGATAGTGAGGAGCTAAACGCTCATGCCGCAACCCGCGAGCTCCTTTTGCGCAGCGCGCTGGATGCAAGGTTGGTACTGTATCATCATGTTATCCGGCGCAAAGTACAGGTGCGGCTTGGTCAGCGCTCAGATGATCCTTTTGCGGCCCATCTGGACGCCCGCTGGGGCGAGAAGCAGGCTGGTGGGTCGATGTTTGTCAACGACCAATTTATCACTTTGCTGCGCAGGCCGGCGCGCGGCAAAGCGGGCTGGGCGGAACGCATTTCGCGTGGATTGCGTGGTCTTGGCAAGCCAGAGCCTGAGGCCAATCTATCTGATGTACGCGCATTGCGGAGTGCTGCCAACGGGATGATCGCCACTTTAGCGCCCTATGGCGCCCGGCTTTTGGGGGATTACAAGGGGCGCACCGGCACCTGTAACGAAGTCTTGGAACTGCTCTCCGCTCTCTATAATGGCGAGATGCGTCCGGTCCGTCGTCCGTCACCAGATACGGATATAGGCGGCATGATACCTTATCGGCGGCTGAGTTTCGGCATGGATGCGATCGAAACACGCGGTGCTGGCTCGGCTGCATTTTCCGCCATGGTGAGCCTGAAGGACTACCCCGACGGCACATCGCCGGGTATGATGGACGCCTTGTTGCGCCTCCCTTTGGAAATGGTGTTGAGCGAGAGTTACGCGCCGTCAGACCGACAGGTGGCGCGCGAACGCATTGATCTGGCAATCCGCCGCCTGCGATCGGCTGATGAAGAGGCCATGGCCGAGCGCGCGGAAATGCAGCGCGCGCGCGATGGGCTGGGTCTGGGCGCGGTTGGTTTTGGCGATCATCATCTGAGCATTCTGGTGCGGACGGATACACTGGCCGCGCTGGATGATGCGACGGCAACTTGTGCAGCGGCCTTGACCGATGTGGGGGCCATCGCTGTGATGGAGGACGTTAATCTTGAACCGGCCTTTTGGGGTCAGTTTCCGGGCAACGAAGCCTATCTCGTTCGTCGTTCGCTGATCTCCAGCGCCAATATGGCCTGTTTTGCTTCCTTGCATGGCTTTTCCATGGGGCAGGCACAGGGTAATCATTGGGGCGAGGCGGTCAGCTTGCTGCAAACCACCAGCGCCACACCTTTCTTTTTCAATTTTCACCACGGCGATCTGGGCAATTTCACCATTATCGGGCCTTCCGGCTCGGGCAAAACTGTCGTGCTGAATTTCCTTGCGGCGCAAGCTCAAAAATTCAATCCGCGGACCATCCTGTTCGACAAGGATCGCGGTGCCGAGATTTTTGTTCGTGCGATTGGTGGCCGCTATAGCCGGATTTCTGCTGGCGAACCTTCCGGTTTCAACCCACTAGCCTTGTCGGACACGCCCGAAAATCGTGCTTTCCTGCGCGATTGGCTGGGCGTGTTGCTGGACGTGAACGGACCGGAGGAGCTAGCGACAATTTCAGCAGCCGTGGATGCGGCCTATGCTAATGATCCAACCTTGCGACGTCTTTCCCATTTCCGCGAATTGCTGGCTGGAACCCGCCGTCCGCAACCGGGCGATCTTGCCAGCAGGTTGGATGCGTGGATCGCACATGGCCCCCATGGCGCGGGGGAACATGCATGGCTGTTCGACAACAGTGTTGACAGATTAGACATGGAAGCCCGCACGCTGGGCTTTGATATGACCGCTCTGCTGGAATCGCCACGTTTGCGAACGCCGGTAATGATGTATCTGTTCCACCGGATCGAAGAGCGTCTGGATGGCAAGCCGACGATGATTTTGATTGACGAGGGCTGGAAGGCGCTCGATGATGAGGTGTTTGCCGCGCGCATCCGCGACTGGCTCAAAACCTTGCGCAAGCGTAATGCGCTAGTGGGTTTCGCGACACAGAGCGCGAGAGACGCGCTGGATAGCAAGATCAGCACCGCGCTAGTTGAGCAAACCGCAACCATGATGTTTATGCCCAACGCCCGCGCAAGAGCCGAAGATTATTGCGAAGGCTTTGGTCTGACCGAGCATGAATTGGATCTGATCCGCAGTTTGCCTGCCCACAGCCGCTGTTTCCTGATCCGCCAGCCTAATGCCTCGGTAGTCGTGCGCCTTGATATGTCGGGGATCCCTGAAGCGATTACGGTTTTGTCGGGCCGTGAATCCAGCGTGCGCAAACTTGACAATTTGCGCGCCGAATTGGGCGATGAACCTTCCGCCTGGTATCCGGCGCTTACCAACCAGCCTTGGCCGGTGCCCGCGCCATGA
PROTEIN sequence
Length: 804
MAKLPGAPMAGAARWLRKESAAGERLPYYRMLDDNVVLLRDGSVMLSLLVPGFCFETADSEELNAHAATRELLLRSALDARLVLYHHVIRRKVQVRLGQRSDDPFAAHLDARWGEKQAGGSMFVNDQFITLLRRPARGKAGWAERISRGLRGLGKPEPEANLSDVRALRSAANGMIATLAPYGARLLGDYKGRTGTCNEVLELLSALYNGEMRPVRRPSPDTDIGGMIPYRRLSFGMDAIETRGAGSAAFSAMVSLKDYPDGTSPGMMDALLRLPLEMVLSESYAPSDRQVARERIDLAIRRLRSADEEAMAERAEMQRARDGLGLGAVGFGDHHLSILVRTDTLAALDDATATCAAALTDVGAIAVMEDVNLEPAFWGQFPGNEAYLVRRSLISSANMACFASLHGFSMGQAQGNHWGEAVSLLQTTSATPFFFNFHHGDLGNFTIIGPSGSGKTVVLNFLAAQAQKFNPRTILFDKDRGAEIFVRAIGGRYSRISAGEPSGFNPLALSDTPENRAFLRDWLGVLLDVNGPEELATISAAVDAAYANDPTLRRLSHFRELLAGTRRPQPGDLASRLDAWIAHGPHGAGEHAWLFDNSVDRLDMEARTLGFDMTALLESPRLRTPVMMYLFHRIEERLDGKPTMILIDEGWKALDDEVFAARIRDWLKTLRKRNALVGFATQSARDALDSKISTALVEQTATMMFMPNARARAEDYCEGFGLTEHELDLIRSLPAHSRCFLIRQPNASVVVRLDMSGIPEAITVLSGRESSVRKLDNLRAELGDEPSAWYPALTNQPWPVPAP*