name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_1288_1
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1244)
|
transposase IS66 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4F4D9
rbh
Transposase and inactivated derivative {ECO:0000313|EMBL:EAT07218.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
transposase
|
|
scnpilot_p_inoc_scaffold_1288_2
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1281..1634)
|
transposase ISAfe4 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B707D1
Transposase and inactivated derivative {ECO:0000313|EMBL:EAT07217.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
isocitrate lyase
|
|
scnpilot_p_inoc_scaffold_1288_3
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1631..2074)
|
transposase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3ADF5
Transposase {ECO:0000313|EMBL:KHL24982.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
transposase
|
|
scnpilot_p_inoc_scaffold_1288_4
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2136..2384)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBH4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KER35075.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium luc
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1288_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2567..3211)
|
XRE family transcriptional regulator n=1 Tax=Sphingobium baderi LL03 RepID=T0G190_9SPHN
PhoB
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:AKH43944.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Alt
|
|
scnpilot_p_inoc_scaffold_1288_6
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3247..4215)
|
Type IV secretion system protein VirB11 n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WI78_9SPHN
rbh
Type IV secretion system protein VirB11 {ECO:0000313|EMBL:EIZ79918.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
type VI secretion protein
|
|
scnpilot_p_inoc_scaffold_1288_7
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4212..5312)
|
Type IV secretory pathway, VirB10 component n=1 Tax=Novosphingobium sp. AP12 RepID=J2FUE7_9SPHN
Scaffold2, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33837.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
type VI secretion protein
|
|
scnpilot_p_inoc_scaffold_1288_8
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5315..6292)
|
Type IV secretion system protein VirB9 n=1 Tax=Sphingomonas sp. LH128 RepID=J8VU42_9SPHN
Type IV secretion system protein VirB9 {ECO:0000313|EMBL:EZP81388.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novos
type VI secretion protein
|
|
scnpilot_p_inoc_scaffold_1288_9
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6289..7515)
|
Type IV secretion system protein VirB6 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJ31_9SPHN
rbh
type IV secretion system protein VirB6
Type IV secretion system protein VirB6 {ECO:0000313|EMBL:CCA91657.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
|
|
scnpilot_p_inoc_scaffold_1288_10
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7512..9923)
|
Type VI secretion protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J660_9SPHN
rbh
Type VI secretion protein {ECO:0000313|EMBL:EQB17429.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
type VI secretion protein
|
|
scnpilot_p_inoc_scaffold_1288_11
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9937..10218)
|
Type VI secretion protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HZE4_9SPHN
Type VI secretion protein {ECO:0000313|EMBL:EQB17428.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
type VI secretion protein
|
|
scnpilot_p_inoc_scaffold_1288_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10225..10527)
|
Type IV secretory pathway, VirB2 component (Pilin) n=1 Tax=Novosphingobium sp. AP12 RepID=J2FUE1_9SPHN
TrbC/VIRB2 family protein {ECO:0000313|EMBL:AKH43939.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobact
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1288_13
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10531..11130)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBQ2_9SPHN
transglycosylase
Uncharacterized protein {ECO:0000313|EMBL:EHJ61334.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
|
|
scnpilot_p_inoc_scaffold_1288_14
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11353..14013)
|
TonB-dependent receptor n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9G7_SPHWW
rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE54286.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
TonB-dependent receptor
|
|
scnpilot_p_inoc_scaffold_1288_15
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14090..15604)
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RX59_9SPHN
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48131.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
|
|
scnpilot_p_inoc_scaffold_1288_16
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15754..16191)
|
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HGX5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB12262.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1288_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16157..16738)
|
Site-specific recombinase, phage integrase family protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBN0_ERYLH
Tyrosine recombinase XerC {ECO:0000313|EMBL:AKH44025.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alter
site-specific recombinase, phage integrase
|
|
scnpilot_p_inoc_scaffold_1288_18
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16839..17156)
|
Plasmid stabilization protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4M3_9SPHN
Plasmid stabilization protein {ECO:0000313|EMBL:EGD60434.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
putative plasmid stabilization protein
|
|
scnpilot_p_inoc_scaffold_1288_19
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17153..17407)
|
Plasmid stabilization protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8T4_9SPHN
Plasmid stabilization protein {ECO:0000313|EMBL:EGD59323.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
parD; Protein parD
|
|
scnpilot_p_inoc_scaffold_1288_20
unknown
|
Not on your lists |
comp(17424..17588)
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1288_21
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17707..17979
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GQ42_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02108.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
AbrB family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_1288_22
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17966..18355
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GN47_9SPHN
PilT protein {ECO:0000313|EMBL:KEQ52929.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum
PilT protein
|
|
scnpilot_p_inoc_scaffold_1288_23
Sphingomonas sp. DC-6, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18383..19642
|
Uncharacterized protein {ECO:0000313|EMBL:AIA08940.1}; TaxID=1283312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
|
|
scnpilot_p_inoc_scaffold_1288_24
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20075..20758
|
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1ML66_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCW16357.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1288_25
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20826..21155)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8T1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59326.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1288_26
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21207..21536)
|
Single-stranded DNA-binding protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4N0_9SPHN
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
single-strand binding protein/primosomal replication protein n
|
|
scnpilot_p_inoc_scaffold_1288_27
unknown
|
Not on your lists |
22002..22238
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1288_28
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22391..22693
|
Helix-turn-helix domain-containing protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LN66_9PROT
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EKF06377.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" so
helix-turn-helix domain-containing protein
|
|
scnpilot_p_inoc_scaffold_1288_29
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22717..23256)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8S7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59330.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1288_30
unknown
|
Not on your lists |
23357..23464
|
This feature has no annotations |