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scnpilot_p_inoc_scaffold_1288_8

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(5315..6292)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirB9 n=1 Tax=Sphingomonas sp. LH128 RepID=J8VU42_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 229.0
  • Bit_score: 213
  • Evalue 4.10e-52
Type IV secretion system protein VirB9 {ECO:0000313|EMBL:EZP81388.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novos similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 229.0
  • Bit_score: 214
  • Evalue 2.00e-52
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 274.0
  • Bit_score: 207
  • Evalue 4.80e-51

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Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGAAGCCCCCGTTCTTTGTTTCATCCGGTATCGTGCTTGCCGCTTTGGTGGCCCCCACCTTGGTGCTTGGGGCGCAAGATGCAGCAACCCGCGCCGATGGTGCTAATAATCTGCCAGCAGCCCCCTCGTCGAATGGTGCGCCCAACAATGCGGTTCCGGCTGTGCCTCCCGCTCCTGCGCCACAGGCAGTTGCGCCAGAACCCGTTCCGGCCTCGCACAACCGTCTGCCCGTGCCAAAGGGCGACCGCCCCACCGATCCGCGCCTACAGTTTCGCCATTATGACCCTCATCGTATCATCCGCATGGATGGCCGCGCCAATGTCCAAGCCAGCATTGTGTTCGATGAGGATGAGCGTATCGAGAATGTTGCCGTGGGCGATGCCAACAGTTGGCAGGTAACGCCCAGCAAACGCGCCAATCTGCTTTTTGTGAAACCATTGGATTTGCGGGCGCGCACCAATATGACAGTGGTTACCGATCAGCGGACTTACTTGTTCGATTTGGTTGCAGGCACGGGCGCTACGCCGGTCTATATGTTGCGCTTCATTTACCCAGAGCCCAAATTGCCTAAGGCAGAGCCGTCGATGATGAGCGAAGCGGAGGTTCAGGCGCTTACATTGAAGGCTGTTCCCGAGATTGCCAAGCCCAATTTTGGCTGGACGCAAAAAGGCAGTTCCGCGCTTTTCCCGGTGCGCCTGTATGATCTGGCGGGCAGCACCTATCTGGCATGGGCGCCGACCCGCCCCATCCCCGCAATTTTGACGCGCGACAGCAAAGGTGCCGAAGGTTTGGTCAATTACGCGGTCCAGAATGGAGAGATCGTGATGGACACGGTTCCCTCAGAGATCATTCTCCGCCTAGGTCGGGATAAAGCGGTTCTGACGCGTAACAACTTGCCCAGTTCGCCCGTGTTGCCAGAACCCCTGAAAGATGCCGGCAGCTTGCCCCATGGGCAGGCTGGCAAGGAAGGTATGTAA
PROTEIN sequence
Length: 326
MKPPFFVSSGIVLAALVAPTLVLGAQDAATRADGANNLPAAPSSNGAPNNAVPAVPPAPAPQAVAPEPVPASHNRLPVPKGDRPTDPRLQFRHYDPHRIIRMDGRANVQASIVFDEDERIENVAVGDANSWQVTPSKRANLLFVKPLDLRARTNMTVVTDQRTYLFDLVAGTGATPVYMLRFIYPEPKLPKAEPSMMSEAEVQALTLKAVPEIAKPNFGWTQKGSSALFPVRLYDLAGSTYLAWAPTRPIPAILTRDSKGAEGLVNYAVQNGEIVMDTVPSEIILRLGRDKAVLTRNNLPSSPVLPEPLKDAGSLPHGQAGKEGM*