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scnpilot_p_inoc_scaffold_1288_6

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(3247..4215)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirB11 n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WI78_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 336.0
  • Bit_score: 488
  • Evalue 5.00e-135
  • rbh
Type IV secretion system protein VirB11 {ECO:0000313|EMBL:EIZ79918.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 336.0
  • Bit_score: 488
  • Evalue 7.00e-135
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 326.0
  • Bit_score: 477
  • Evalue 4.20e-132

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGATCGATCCTGCGATTCCACCGCAAAGTGTCTATTTGGATGCCTATTTGCGGCCATTCCGTCCTTGGCTTGATCGTGACTCAGTGACCGAGATTATGGTCAATCGTCCAGGCGAGGTGTGGGTTGAAGATTCCGAGAACGGGGGCATGCAGCAGTATTCGCTTCCGGAAGTTGATGCAAACCTCCTTCAGCGACTTGCCGAGCAGGTTGCCCGTGTTAGCCACCAGGCTATTAACCGGGAGCACCCATTGCTTTCTGCAACTCTGCCCGATGGTGCACGTATCCAGCTTTGCGGACCACCGGCTACCCGCGCACACTGGGCTCTAGCTATTCGTCGCCATCGGTTGCTGGATCTTACCCTCGATGACTATGATCGAGGCGCGGTAAAGCTCAAAAAGCCAGTGGTTGCGCCTGAACCAGTTTCTCACCCTATTGCGTTTCTTCGCCATGCCATTGCGCACCGGCAAACAATTCTCATTTCTGGCGGGACGTCAACGGGGAAGACGACGTTTCTCAACGCCATGATGCGCGAGATTCCAAGGCAAGAGCGTGTTGTGTTGGTCGAGGACACCCCGGAGTTGCAGTTTCCCGGTAGCAACAGTGTTGGCCTGATAGCCGTAAAAGGTGAACTGGGTGAGGCGCGTGTGACAGCAAATGAGTTGCTGCAAGCTGCTTTGCGATTGCGCCCGGATAGGATTGTGCTTGGCGAATTGCGAGGGACCGAGACAATAAGTTTCTTGCGTGCTGTCAACACCGGTCATCCTGGGTCGTTTTCAACTGTCCATGCTAACAGCCCCCGGGGCGCGCTGGACCAGATTGCCTTGATGGCGATGCAGGCAGGGATCGGCTTGAGTCGTTCGGAAACCTTGGAATATTCTTCGACAGTAATAGATGTCGTTGTCCAATTGGATAGAATCGATGGGAGGCGGGGAGTTGCCGAGGTTTCACGCTCGTCCGAATTAATTTGA
PROTEIN sequence
Length: 323
MIDPAIPPQSVYLDAYLRPFRPWLDRDSVTEIMVNRPGEVWVEDSENGGMQQYSLPEVDANLLQRLAEQVARVSHQAINREHPLLSATLPDGARIQLCGPPATRAHWALAIRRHRLLDLTLDDYDRGAVKLKKPVVAPEPVSHPIAFLRHAIAHRQTILISGGTSTGKTTFLNAMMREIPRQERVVLVEDTPELQFPGSNSVGLIAVKGELGEARVTANELLQAALRLRPDRIVLGELRGTETISFLRAVNTGHPGSFSTVHANSPRGALDQIALMAMQAGIGLSRSETLEYSSTVIDVVVQLDRIDGRRGVAEVSRSSELI*