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scnpilot_p_inoc_scaffold_1288_12

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(10225..10527)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB2 component (Pilin) n=1 Tax=Novosphingobium sp. AP12 RepID=J2FUE1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 100.0
  • Bit_score: 146
  • Evalue 1.10e-32
TrbC/VIRB2 family protein {ECO:0000313|EMBL:AKH43939.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobact similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 99.0
  • Bit_score: 153
  • Evalue 1.30e-34
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 99.0
  • Bit_score: 145
  • Evalue 6.90e-33

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGTCTTATGTCCGTAAACTGGCCTTGGCACTGGTGGTGGCTATGCCGCAAACCGCCTTGGCGCAGGCTGCCGATCCGCGCGGTTCTGGCCCGATTGTGGCGGCCTTGGGCTGGTTGCAGGGCACACTGCTGGGCAATGTCGCCACGGCGGTTGCCGTAATGGCGGTGGCAGCGGTGGGCTTCATGATGCTGACTGGGCGCATGAATTGGCGCTTTGGTGCGACTGTGATCATTGGCTGCTTTATCCTTTTTGGGGCTAGCGCCATCGTTTCCGGCATTCAGTCTGCCGCGGCAGGCGGATAG
PROTEIN sequence
Length: 101
MSYVRKLALALVVAMPQTALAQAADPRGSGPIVAALGWLQGTLLGNVATAVAVMAVAAVGFMMLTGRMNWRFGATVIIGCFILFGASAIVSGIQSAAAGG*