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scnpilot_p_inoc_scaffold_1006_17

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(20732..21742)

Top 3 Functional Annotations

Value Algorithm Source
CysB family transcriptional regulator n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A58CA9 similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 328.0
  • Bit_score: 431
  • Evalue 7.50e-118
  • rbh
bacterial regulatory helix-turn-helix, lysR family protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 303.0
  • Bit_score: 334
  • Evalue 4.60e-89
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:AIP24768.1}; Cys regulon transcriptional activator {ECO:0000313|EMBL:ABC39046.1}; TaxID=271848 species="Bacteria; Proteoba similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 303.0
  • Bit_score: 334
  • Evalue 2.30e-88

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Taxonomy

Burkholderia thailandensis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGAATTTCCAGCAATTGCGCTATGTGCGGGCCGCCTTGCACAATGACCTCAATCTGACCGAGGTGGCCAATCAGCTCTTCACCTCGCAATCGGGGGTCAGCAAGCAGATCCGCGATCTGGAGGCGGAATTGGGCATCGACATTTTTGTGCGCCGGGGCAAAAGGCTGGTGGGCCTGACCAAGGCGGGCGGGCATGTGGCCGAGGTGGTCGATCGCCTGCTGCATGAGGCGGATAATCTGAAACGTCTGTCGGCCCAGTTCGTGGCGCAGGACAAGGGGCGGCTGACGATTGCGGCGACGCATAATCAGGCCTCCTATGTGCTGCCCCCGGTGCTTTTGCGCTTTGCCCGCGAATTTCCCGATGTCGAGGTGGAAATCCGCCAGGGCACGCCGCGCTATGTTTCGGACATGCTGCTGCGCGGCGAGGCCGATCTGGGGCTGGCGACACAGGCGCTGGACGAGGTATCGGACCTGTCGACCTTCACCTGTTTCGATTGGCATCATGTGGTGATCGTTCCCGATGGCCATCCGCTTTCCCGCCTGCCTGCACCCACGCTGGCCGATATCGCCGGGTTCCCGCTGATTACTTACAGCCGCGATTTCGCGGGCGGGTCGGGGGTGGTCGATGCGTTCGAGGCGGCGGGGATCAGGCCCGATCTGCGGCTGACCGCGATGGATGCCGATGTCATCAAGACCTATGTGCGCCTTGGCATGGGGGTGGGCATTGTCGCGCAGATGGCGATGATCAACGGGCATGGCGAGGGGGTGCAGATCCTGCCCCAATCGCACCGCCTGTTCCCGCATTCCAGCACCAAGGTTGCGCTGCTCAAAGGCTCCTTGCTGCGCAACTATGCCTATAGTCTGGTGCGGATGCTGGCGCCCCATGTGCCGCAAAAGGTGCTGACGGGCGCGCGGCCAATGCCGGTGCTGACCCAGCGTCTGGCCAGTTTTGTCGAGCGTTCGGACCTGCATTTCGAATGGGGCAATGCGCCCCATTCGGTTGCGGCTTAG
PROTEIN sequence
Length: 337
MNFQQLRYVRAALHNDLNLTEVANQLFTSQSGVSKQIRDLEAELGIDIFVRRGKRLVGLTKAGGHVAEVVDRLLHEADNLKRLSAQFVAQDKGRLTIAATHNQASYVLPPVLLRFAREFPDVEVEIRQGTPRYVSDMLLRGEADLGLATQALDEVSDLSTFTCFDWHHVVIVPDGHPLSRLPAPTLADIAGFPLITYSRDFAGGSGVVDAFEAAGIRPDLRLTAMDADVIKTYVRLGMGVGIVAQMAMINGHGEGVQILPQSHRLFPHSSTKVALLKGSLLRNYAYSLVRMLAPHVPQKVLTGARPMPVLTQRLASFVERSDLHFEWGNAPHSVAA*