name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_1006_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..118
|
bifunctional D-altronate/D-mannonate dehydratase n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002DC0B99
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:KHS44966.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
mandelate racemase/muconate lactonizing protein
|
|
scnpilot_p_inoc_scaffold_1006_2
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(177..1589)
|
major facilitator transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B44DD0
rbh
D-xylose proton-symporter XylE {ECO:0000313|EMBL:CCW19377.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
sugar transporter
|
|
scnpilot_p_inoc_scaffold_1006_3
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1610..2467)
|
gluconolaconase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5F125
rbh
Gluconolaconase {ECO:0000313|EMBL:EQB31839.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense
putative gluconolactonase
|
|
scnpilot_p_inoc_scaffold_1006_4
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2467..3243)
|
3-oxoacyl-ACP reductase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6E147
rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KER35619.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium luc
SDR-family protein
|
|
scnpilot_p_inoc_scaffold_1006_5
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3240..4370)
|
fumarylacetoacetate hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B62DF4
rbh
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:ETI64347.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
fumarylacetoacetate hydrolase family protein
|
|
scnpilot_p_inoc_scaffold_1006_6
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4636..6414
|
Scaffold15, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31002.1}; EC=4.2.1.9 {ECO:0000313|EMBL:KIS31002.1};; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadal
Dihydroxyacid dehydratase/phosphogluconate dehydratase n=1 Tax=Novosphingobium sp. AP12 RepID=J2FXU7_9SPHN
rbh
dihydroxy-acid dehydratase
|
|
scnpilot_p_inoc_scaffold_1006_7
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6451..8055)
|
Sulfatase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICG5_9SPHN
rbh
sulfatase
Sulfatase {ECO:0000313|EMBL:CCA89990.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;
|
|
scnpilot_p_inoc_scaffold_1006_8
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8073..8699)
|
UPI0003D6950D related cluster n=1 Tax=unknown RepID=UPI0003D6950D
Maleylacetoacetate isomerase {ECO:0000313|EMBL:ETI64247.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
maleylacetoacetate isomerase
|
|
scnpilot_p_inoc_scaffold_1006_9
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8692..9387)
|
UPI0003D6705C related cluster n=1 Tax=unknown RepID=UPI0003D6705C
rbh
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:ETI64246.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
fumarylacetoacetate (FAA) hydrolase
|
|
scnpilot_p_inoc_scaffold_1006_10
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9389..10435)
|
gentisate 1,2-dioxygenase (EC:1.13.11.4)
UPI0003D618F8 related cluster n=1 Tax=unknown RepID=UPI0003D618F8
rbh
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:ETI64245.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium s
|
|
scnpilot_p_inoc_scaffold_1006_11
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10640..11683
|
Sal operon transcriptional repressor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNK0_9SPHN
rbh
Sal operon transcriptional repressor {ECO:0000313|EMBL:CCW18299.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
LacI-family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_1006_12
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11684..13003)
|
MFS transporter n=1 Tax=Sphingobium ummariense RL-3 RepID=T0ILM7_9SPHN
rbh
MFS transporter {ECO:0000313|EMBL:EQB29720.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense
MFS transporter
|
|
scnpilot_p_inoc_scaffold_1006_13
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13032..14525)
|
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GWS0_9SPHN
rbh
Scaffold8, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31732.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1006_14
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14525..16915)
|
TonB-dependent receptor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MM77_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:CCW18300.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
outer membrane receptor (OMR) family protein
|
|
scnpilot_p_inoc_scaffold_1006_15
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17291..19372
|
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HXN1_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB16833.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
glycoside hydrolase
|
|
scnpilot_p_inoc_scaffold_1006_16
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19764..20735
|
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDI4_9SPHN
rbh
Serine O-acetyltransferase {ECO:0000313|EMBL:EGD57275.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
|
|
scnpilot_p_inoc_scaffold_1006_17
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20732..21742)
|
CysB family transcriptional regulator n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A58CA9
rbh
bacterial regulatory helix-turn-helix, lysR family protein
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:AIP24768.1}; Cys regulon transcriptional activator {ECO:0000313|EMBL:ABC39046.1}; TaxID=271848 species="Bacteria; Proteoba
|
|
scnpilot_p_inoc_scaffold_1006_18
unknown
|
Not on your lists |
22025..23212
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1006_19
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23470..24300
|
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
protein involved in catabolism of external DNA n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036E6301
rbh
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_1006_20
unknown
|
Not on your lists |
24661..24948
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1006_21
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25610..26986
|
integrase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262BCE4
rbh
integrase family protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
integrase family protein
|
|
scnpilot_p_inoc_scaffold_1006_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27247..27639
|
Uncharacterized protein family UPF0150 n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2U5_SPHCR
CopG family transcriptional regulator
CopG family transcriptional regulator {ECO:0000313|EMBL:AJP72942.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
|
|
scnpilot_p_inoc_scaffold_1006_23
unknown
|
Not on your lists |
27723..27986
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1006_24
unknown
|
Not on your lists |
27979..28407
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1006_25
unknown
|
Not on your lists |
28407..28844
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1006_26
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28940..29416
|
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C349
Uncharacterized protein {ECO:0000313|EMBL:EZP70746.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas pau
|
|
scnpilot_p_inoc_scaffold_1006_27
unknown
|
Not on your lists |
29471..30070
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_1006_28
unknown
|
Not on your lists |
30157..30366
|
Uncharacterized protein {ECO:0000313|EMBL:CPR22105.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
|
|
scnpilot_p_inoc_scaffold_1006_29
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30545..30910
|
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB91_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEZ12872.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
|
|
scnpilot_p_inoc_scaffold_1006_30
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30903..31166
|
replicative DNA helicase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B56FED
DNA helicase
DNA helicase {ECO:0000313|EMBL:AHE51699.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenen
|