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scnpilot_p_inoc_scaffold_1895_6

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(5854..6420)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035D50C6 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 188.0
  • Bit_score: 343
  • Evalue 1.20e-91
  • rbh
FecI sigma-24 factor {ECO:0000313|EMBL:EZP67885.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 184.0
  • Bit_score: 218
  • Evalue 7.80e-54
rpoE; ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 188.0
  • Bit_score: 217
  • Evalue 4.60e-54

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGACAGGGCAGCTCTCTGAGCTCGAAGATCAGGACTTGGCTTCGTTAGCCATCGGCGGAAACCAGGCCGCTTGTTGCGAGCTTGTCCGCCGACATCGTGATTGGGTGTACAGGCTTGTTCGCGCGCAGATCGGCGATGCGGTTGAAAGCCTGGATGTCACACAGGGGGCATTCATCGCGGCGTTTAGCGCCCTTGACCGCTTCGATCGTGCGCGCCCTTTCAAGCTATGGCTGGCTCGTATTGCTTTGAACAAGTGCAAGGACTGGAGGCGGCGTGCGCTGGTGCGCAGGTTTATGCTTGCAGCAGCCCCTTTGACGGAAGCTGAAGAGGTGGCTGATCCGGCTCCAGGAGCTGACATCACGGCCTCCGACCGATCCGAATTAAAAGTGACCCTGAAGGCAATTTCCGAATTGCCCGCTTCATTGCGCGAACCCCTCATCCTCCGGACCATTGATGCGCGCGCACAGGCGGAAACCGCGCAGATCCTAGGATTGAGCGAGAAGGCTGTCGAAGCGAGAGTTTATCGGGCGCGAGCACGCTTGGTGGACAAACTCAAAAAAATTTGA
PROTEIN sequence
Length: 189
VTGQLSELEDQDLASLAIGGNQAACCELVRRHRDWVYRLVRAQIGDAVESLDVTQGAFIAAFSALDRFDRARPFKLWLARIALNKCKDWRRRALVRRFMLAAAPLTEAEEVADPAPGADITASDRSELKVTLKAISELPASLREPLILRTIDARAQAETAQILGLSEKAVEARVYRARARLVDKLKKI*