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scnpilot_p_inoc_scaffold_1895

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1895_1
unknown

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comp(3..158)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1895_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(617..1225)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000364CCE8 rbh
Response regulator UhpA {ECO:0000313|EMBL:KHS49403.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
two component LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_1895_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1215..2738)
DNA (1524bp) protein (508aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000380409E rbh
two-component system sensor histidine kinase
scnpilot_p_inoc_scaffold_1895_4
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2760..3863)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037FD112 rbh
Copper resistance protein CopB {ECO:0000313|EMBL:EQB04103.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
copper resistance B
scnpilot_p_inoc_scaffold_1895_5
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3860..5788)
DNA (1929bp) protein (643aa)
copper-binding protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003748463 rbh
Putative multicopper oxidase {ECO:0000313|EMBL:KHS45212.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
copper resistance protein CopA
scnpilot_p_inoc_scaffold_1895_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5854..6420)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035D50C6 rbh
FecI sigma-24 factor {ECO:0000313|EMBL:EZP67885.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
rpoE; ECF-type sigma factor
scnpilot_p_inoc_scaffold_1895_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6417..6851)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000371DE5D
heavy metal resistance protein
Heavy metal resistance protein {ECO:0000313|EMBL:BAK67775.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
scnpilot_p_inoc_scaffold_1895_8
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7261..7644
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000373C56E
copC; copper resistance protein CopC
Copper resistance protein CopC {ECO:0000313|EMBL:BAI95320.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
scnpilot_p_inoc_scaffold_1895_9
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7649..8584
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000361CFF5 rbh
Copper resistance protein CopD {ECO:0000313|EMBL:AKH18789.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
copD; copper resistance protein CopD
scnpilot_p_inoc_scaffold_1895_10
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8622..10973
DNA (2352bp) protein (784aa)
Copper-transporting P-type ATPase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J5I4_9SPHN rbh
Copper-transporting P-type ATPase {ECO:0000313|EMBL:EQB33216.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphin
copA; cation transport ATPase
scnpilot_p_inoc_scaffold_1895_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11005..11727
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000369465B rbh
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26873.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
scnpilot_p_inoc_scaffold_1895_12
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11789..12217
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003653328
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26572.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_p_inoc_scaffold_1895_13
unknown

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comp(12307..12519)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1895_14
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12554..13207)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037E8DC4
Co/Zn/Cd efflux system component {ECO:0000313|EMBL:KEZ14279.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
cation efflux protein
scnpilot_p_inoc_scaffold_1895_15
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13276..13680
DNA (405bp) protein (135aa)
UPI0003D6936F related cluster n=1 Tax=unknown RepID=UPI0003D6936F
MerR family transcriptional regulator {ECO:0000313|EMBL:KHA64812.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
MerR family transcriptional regulator
scnpilot_p_inoc_scaffold_1895_16
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13940..14332
DNA (393bp) protein (131aa)
transposase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B53217
Uncharacterized protein {ECO:0000313|EMBL:EQB13022.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1895_17
unknown

Not on your lists

comp(14407..14724)
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1895_18
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14755..15891
DNA (1137bp) protein (379aa)
transposase, partial n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5E542 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB12535.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
transposase
Displaying 18 items

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