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scnpilot_p_inoc_scaffold_972

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_972_1

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527..898
DNA (372bp) protein (124aa)
Hypothetical 15.3 kDa protein n=1 Tax=uncultured bacterium RepID=Q91UX9_9BACT
Hypothetical 15.3 kDa protein {ECO:0000313|EMBL:CAC82746.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_972_2

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950..1714
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9PC71_PSEAI rbh
transglycosylase SLT domain protein
TraA protein {ECO:0000313|EMBL:CAC79183.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_972_3

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1727..4084
DNA (2358bp) protein (786aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=77133 species="Bacteria; environment
DNA topoisomerase 1 n=1 Tax=uncultured bacterium RepID=Q91UQ5_9BACT rbh
scnpilot_p_inoc_scaffold_972_4

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4250..4555
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9P7V7_PSEAI
TraC protein {ECO:0000313|EMBL:CAC79181.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
trbC/VIRB2 family protein
scnpilot_p_inoc_scaffold_972_5

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4571..4894
DNA (324bp) protein (108aa)
TraD protein n=1 Tax=uncultured bacterium RepID=Q91UQ7_9BACT
type IV secretory pathway, VirB3-like family protein
TraD protein {ECO:0000313|EMBL:CAC79180.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_972_6

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4904..7438
DNA (2535bp) protein (845aa)
Type IV secretion system protein virB4 n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9P9K1_PSEAI rbh
ptlC; type IV secretion system protein ptlC
TraE protein {ECO:0000313|EMBL:CAC79179.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_972_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7443..8162
DNA (720bp) protein (240aa)
Type IV secretion system protein virB5 n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T116_XANCT
VirB5 protein {ECO:0000313|EMBL:GAO26858.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Minor pilin of type IV secretion complex, VirB5
scnpilot_p_inoc_scaffold_972_8
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8276..8584
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9P7W2_PSEAI
TraG {ECO:0000313|EMBL:ABZ01501.1}; TaxID=158899 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans.;"
putative traG protein
scnpilot_p_inoc_scaffold_972_9
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8596..9681
DNA (1086bp) protein (362aa)
VirB6 n=1 Tax=Collimonas fungivorans RepID=B0ZB79_9BURK rbh
VirB6 {ECO:0000313|EMBL:ABZ01500.1}; TaxID=158899 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans.;"
trbL/VirB6 plasmid conjugal transfer family protein
scnpilot_p_inoc_scaffold_972_10
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9994..10725
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9PC81_PSEAI rbh
virB8; type IV secretion system protein virB8
VirB8 {ECO:0000313|EMBL:ABZ01498.1}; TaxID=158899 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans.;"
scnpilot_p_inoc_scaffold_972_11

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10722..11600
DNA (879bp) protein (293aa)
TraK protein n=1 Tax=uncultured bacterium RepID=Q91UW8_9BACT rbh
virB9; P-type conjugative transfer protein VirB9 rbh
TraK protein {ECO:0000313|EMBL:CAC82757.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_972_12
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11597..12733
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9P7W6_PSEAI rbh
VirB10 {ECO:0000313|EMBL:ABZ01496.1}; TaxID=158899 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans.;"
bacterial conjugation TrbI-like family protein
scnpilot_p_inoc_scaffold_972_13
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12711..13781
DNA (1071bp) protein (357aa)
VirB11 n=1 Tax=Collimonas fungivorans RepID=B0ZB74_9BURK rbh
VirB11 {ECO:0000313|EMBL:ABZ01495.1}; TaxID=158899 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans.;"
type IV secretion system protein VirB11
scnpilot_p_inoc_scaffold_972_14

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14003..16597
DNA (2595bp) protein (865aa)
TraN protein n=1 Tax=uncultured bacterium RepID=Q91UW5_9BACT rbh
TraN protein {ECO:0000313|EMBL:CAC82760.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
type IV secretory system Conjugative DNA transfer family protein
scnpilot_p_inoc_scaffold_972_15

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16708..17427
DNA (720bp) protein (240aa)
Hypothetical 25.4 kDa protein n=1 Tax=uncultured bacterium RepID=Q91UW4_9BACT
Hypothetical 25.4 kDa protein {ECO:0000313|EMBL:CAC82761.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_972_16

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17439..18836
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9PAZ8_PSEAI rbh
putative traO protein
TraO protein {ECO:0000313|EMBL:CAC79166.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_972_17
unknown

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18833..19195
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_972_18
unknown

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19201..19461
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_972_19

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19939..20499
DNA (561bp) protein (187aa)
TraQ protein n=1 Tax=uncultured bacterium RepID=Q91US3_9BACT
TraQ protein {ECO:0000313|EMBL:CAC79164.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ompA family protein
scnpilot_p_inoc_scaffold_972_20
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20513..21091
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans RepID=B0ZB69_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ABZ01490.1}; TaxID=158899 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivora
trbM; conjugal transfer protein TrbM
scnpilot_p_inoc_scaffold_972_21
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21091..21330
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JPA5_PSEST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPL59862.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
scnpilot_p_inoc_scaffold_972_22
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21336..21740
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Xanthomonas RepID=Q8PRJ7_XANAC
Uncharacterized protein {ECO:0000313|EMBL:CEH61461.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri
hypothetical protein
scnpilot_p_inoc_scaffold_972_23
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21846..22157)
DNA (312bp) protein (104aa)
addiction module antidote protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377023
Addiction module antidote protein {ECO:0000313|EMBL:EWS77982.1}; TaxID=1444770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fas
hypothetical protein
scnpilot_p_inoc_scaffold_972_24
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(22154..22495)
DNA (342bp) protein (114aa)
addiction module protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377024
uncharacterized protein conserved in bacteria
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAO84291.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadac
scnpilot_p_inoc_scaffold_972_25

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comp(22578..23663)
DNA (1086bp) protein (362aa)
TraS protein n=1 Tax=uncultured bacterium RepID=Q91US6_9BACT rbh
relaxase/mobilization nuclease domain protein rbh
TraS protein {ECO:0000313|EMBL:CAC79161.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_972_26

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comp(23650..24249)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q91US7_9BACT rbh
bacterial mobilization family protein
Uncharacterized protein {ECO:0000313|EMBL:CAC79160.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_972_27

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comp(24485..25027)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9P9B3_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAC79159.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_972_28

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comp(25024..26166)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9PKM9_PSEAI rbh
KorB protein {ECO:0000313|EMBL:CAC79158.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ParB/RepB/Spo0J family partition domain protein
scnpilot_p_inoc_scaffold_972_29

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comp(26166..26960)
DNA (795bp) protein (265aa)
IncC protein n=1 Tax=uncultured bacterium RepID=Q91UT0_9BACT rbh
ATPase MipZ family protein
IncC protein {ECO:0000313|EMBL:CAC79157.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_972_30
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26967..27356)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans RepID=B0ZB63_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ABZ01484.1}; TaxID=158899 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivora
hypothetical protein
Displaying items 1-30 of 38 in total

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