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scnpilot_p_inoc_scaffold_2264

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2264_1
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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81..1763
DNA (1683bp) protein (561aa)
transposase TniA n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959388 rbh
Integrase, catalytic region {ECO:0000313|EMBL:ABO60116.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia com
integrase catalytic subunit rbh
scnpilot_p_inoc_scaffold_2264_2
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1766..2674
DNA (909bp) protein (303aa)
TniB n=1 Tax=Curvibacter lanceolatus RepID=UPI00035DA1A8 rbh
TniB family protein
NTP-binding protein TniB (Tn6048) {ECO:0000313|EMBL:ABF11835.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia
scnpilot_p_inoc_scaffold_2264_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2855..3469
DNA (615bp) protein (205aa)
DNA invertase n=1 Tax=Methyloversatilis universalis RepID=UPI0003773682 rbh
TniR protein {ECO:0000313|EMBL:KGH12751.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas t
tniR; Transposon Tn552 resolvase
scnpilot_p_inoc_scaffold_2264_4
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3533..3967)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FXP7_BURVI
Membrane protein {ECO:0000313|EMBL:KGH12750.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomon
hypothetical protein
scnpilot_p_inoc_scaffold_2264_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3993..5348)
DNA (1356bp) protein (452aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamo
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JV02_BURVG
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_2264_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5324..5989)
DNA (666bp) protein (222aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JV01_BURVG
XRE family transcriptional regulator {ECO:0000313|EMBL:KGH12748.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas tes
two component transcriptional regulator
scnpilot_p_inoc_scaffold_2264_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6012..6770)
DNA (759bp) protein (253aa)
PF03988 repeat protein n=2 Tax=Burkholderia cenocepacia RepID=U1ZGT2_9BURK rbh
Membrane protein {ECO:0000313|EMBL:KGH12747.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomon
hypothetical protein
scnpilot_p_inoc_scaffold_2264_8
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6787..7239)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Burkholderia cenocepacia RepID=U1Y497_9BURK
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CAR52799.1}; TaxID=216591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia compl
scnpilot_p_inoc_scaffold_2264_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7268..8050)
DNA (783bp) protein (261aa)
PF03988 repeat protein n=2 Tax=Burkholderia cenocepacia RepID=U1ZGX1_9BURK rbh
Membrane protein {ECO:0000313|EMBL:KGH12745.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomon
hypothetical protein
scnpilot_p_inoc_scaffold_2264_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8120..8716)
DNA (597bp) protein (199aa)
Phosphoesterase PA-phosphatase related n=1 Tax=Burkholderia sp. H160 RepID=B5WPI3_9BURK
Phosphoesterase {ECO:0000313|EMBL:KGH12744.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomona
putative transport permease
scnpilot_p_inoc_scaffold_2264_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8773..9108)
DNA (336bp) protein (112aa)
Propeptide, PepSY amd peptidase M4 n=5 Tax=Bacteria RepID=A4JUZ6_BURVG
Peptidase M4 {ECO:0000313|EMBL:KGH12743.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas t
propeptide, PepSY amd peptidase M4
scnpilot_p_inoc_scaffold_2264_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9297..9692
DNA (396bp) protein (132aa)
transposase IS3 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000378E139
Uncharacterized protein {ECO:0000313|EMBL:GAD23038.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
transposase IS3/IS911 family protein
scnpilot_p_inoc_scaffold_2264_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9700..10032
DNA (333bp) protein (111aa)
transposase IS66 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037213FF
Transposase {ECO:0000313|EMBL:GAD23037.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
IS66 Orf2 like
scnpilot_p_inoc_scaffold_2264_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10113..11633
DNA (1521bp) protein (507aa)
transposase IS66 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003824114 rbh
Transposase {ECO:0000313|EMBL:GAD23036.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
transposase is66
scnpilot_p_inoc_scaffold_2264_15
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12182..13942
DNA (1761bp) protein (587aa)
ATPase n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BBA8_RALP1 rbh
AAA ATPase domain protein {ECO:0000313|EMBL:KIN90559.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
ATPase
scnpilot_p_inoc_scaffold_2264_16
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13942..15111
DNA (1170bp) protein (390aa)
dcm; DNA (cytosine-5-)-methyltransferase family protein (EC:2.1.1.37)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Cytosine-specific methyltransferase n=1 Tax=Pseudomonas syringae pv. japonica str. M301072 RepID=F3FQA5_PSESX rbh
scnpilot_p_inoc_scaffold_2264_17
Cupriavidus oxalaticus, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15763..16113)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Cupriavidus oxalaticus RepID=Q84EM4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CAD61160.1}; TaxID=96344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus oxalatic
conjugal transfer protein
scnpilot_p_inoc_scaffold_2264_18
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16110..17372)
DNA (1263bp) protein (421aa)
Conjugation TrbI family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9W8_ACISJ rbh
conjugation TrbI family protein
Conjugation TrbI family protein {ECO:0000313|EMBL:ABM43043.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_p_inoc_scaffold_2264_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17375..18367)
DNA (993bp) protein (331aa)
p-type conjugative transfer protein trbg n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUH1_9BURK
p-type conjugative transfer protein trbg
p-type conjugative transfer protein trbg {ECO:0000313|EMBL:AFU46573.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
scnpilot_p_inoc_scaffold_2264_20
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18364..18870)
DNA (507bp) protein (169aa)
Conjugal transfer protein n=2 Tax=Comamonadaceae RepID=B9MII6_ACIET
conjugal transfer protein TrbF
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AIJ45778.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testo
Displaying 20 items

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