ggKbase home page

scnpilot_p_inoc_scaffold_1884_1

Organism: SCNpilot_P_inoc_Mobile_elements_general

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(2..181)

Top 3 Functional Annotations

Value Algorithm Source
TraA n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3G0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 60.0
  • Bit_score: 91
  • Evalue 4.30e-16
Conjugal transfer protein TraA {ECO:0000313|EMBL:AJW29856.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 60.0
  • Bit_score: 89
  • Evalue 1.80e-15
ti-type conjugative transfer relaxase traa similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 59.0
  • Bit_score: 76
  • Evalue 2.40e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Achromobacter sp. LM16 → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
GTGGCGATCTACCACCTTTCCACCGCTCCGATGAGTCGCACCGAAGGCCGCAGCGCCGTGGCGGCGGCGGCCTATCGGTCCGGCACGGAGCTGGCGGACGCGCGCACCGGGCAGGTGTTCGACTACACCCGCAAGGGCGGCGTCCTGTCGGCCGAGATTGTGACGCCGGCCGGCGTGCCG
PROTEIN sequence
Length: 60
VAIYHLSTAPMSRTEGRSAVAAAAYRSGTELADARTGQVFDYTRKGGVLSAEIVTPAGVP