ggKbase home page

scnpilot_p_inoc_scaffold_1884

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1884_1
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..181)
DNA (180bp) protein (60aa)
TraA n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3G0_PSEAI
Conjugal transfer protein TraA {ECO:0000313|EMBL:AJW29856.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
ti-type conjugative transfer relaxase traa
scnpilot_p_inoc_scaffold_1884_2
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

374..625
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae KPNIH18 RepID=J2HMF9_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:CEI36836.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri
hypothetical protein
scnpilot_p_inoc_scaffold_1884_3
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

627..857
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae KPNIH18 RepID=J2T384_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:EFF42770.1}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscan
traD; conjugal transfer protein Dtr system
scnpilot_p_inoc_scaffold_1884_4
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

854..3547
DNA (2694bp) protein (898aa)
Uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=J1ZPM0_KLEPN rbh
Plasmid conjugation trag transmembrane protein {ECO:0000313|EMBL:EFF42772.1}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" sou
conjugal transfer protein TraG
scnpilot_p_inoc_scaffold_1884_5
unknown

Not on your lists

3558..3746
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1884_6
unknown

Not on your lists

comp(3836..4060)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1884_7
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5134..6183)
DNA (1050bp) protein (350aa)
RepA-like protein n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB1386 RepID=K8FUY9_9XANT rbh
Replication initiator and transcription repressor protein {ECO:0000313|EMBL:EFF42764.1}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthom
repA-like protein
scnpilot_p_inoc_scaffold_1884_8
Synechococcus sp. CC9311, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6195..7112)
DNA (918bp) protein (306aa)
Peptidase, S1C (Protease Do) family protein {ECO:0000313|EMBL:ABI45502.1}; EC=3.4.21.- {ECO:0000313|EMBL:ABI45502.1};; TaxID=64471 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcale
Peptidase, S1C (Protease Do) family protein n=1 Tax=Synechococcus sp. (strain CC9311) RepID=Q0I8T5_SYNS3
peptidase, S1C (protease Do) family protein
scnpilot_p_inoc_scaffold_1884_9
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7109..7288)
DNA (180bp) protein (60aa)
Uncharacterized protein; TaxID=1124947 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Heidelberg str. CVM24388.;"
scnpilot_p_inoc_scaffold_1884_10
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7339..7593)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae KPNIH18 RepID=J2A8Q4_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:EGO93195.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp
hypothetical protein
scnpilot_p_inoc_scaffold_1884_11
Acetobacter pasteurianus, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7623..8273)
DNA (651bp) protein (217aa)
ParA protein n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae KPNIH18 RepID=J2HMF5_KLEPN rbh
Chromosome partitioning protein {ECO:0000313|EMBL:CCT61023.1}; TaxID=1266844 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobac
ATPase involved in chromosome partitioning-like protein
scnpilot_p_inoc_scaffold_1884_12
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8365..8982)
DNA (618bp) protein (206aa)
Resolvase n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae KPNIH18 RepID=J1ZPL4_KLEPN
DNA-invertase hin {ECO:0000313|EMBL:EXJ09171.1}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
resA; site-specific recombinase
scnpilot_p_inoc_scaffold_1884_13
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8975..9244)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Yersinia pestis RepID=UPI0002DB731C
Uncharacterized protein {ECO:0000313|EMBL:KGD63337.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
hypothetical protein
scnpilot_p_inoc_scaffold_1884_14
unknown

Not on your lists

comp(9414..9950)
DNA (537bp) protein (179aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1884_15
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10436..11791
DNA (1356bp) protein (452aa)
YadA protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CZD5_STEMA
NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97397.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
outer membrane protein XadA
scnpilot_p_inoc_scaffold_1884_16
Halomonas sp. S2151, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11886..12170
DNA (285bp) protein (95aa)
XRE family transcriptional regulator n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2FV81_OCESG
XRE family transcriptional regulator
Virulence protein {ECO:0000313|EMBL:KJZ16822.1}; TaxID=579478 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. S2151.;"
scnpilot_p_inoc_scaffold_1884_17
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12235..12792)
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Klebsiella pneumoniae subsp. pneumoniae KPNIH18 RepID=J2T3E1_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:EFF42768.1}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscan
scnpilot_p_inoc_scaffold_1884_18
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12819..15950)
DNA (3132bp) protein (1044aa)
Conjugal transfer protein traA n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B6Q9_METEA
Conjugal transfer protein traA
Conjugal transfer protein traA {ECO:0000313|EMBL:ACS44141.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylo
Displaying 18 items

View Taxonomy