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scnpilot_p_inoc_scaffold_3683

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3683_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..971)
DNA (969bp) protein (323aa)
Putative D-amino acid oxidase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEU3_THIDA
D-amino acid oxidase
Putative D-amino acid oxidase {ECO:0000313|EMBL:AAZ97819.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.
scnpilot_p_inoc_scaffold_3683_2
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1343..1735
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003671B35
methylation protein Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
methylation
scnpilot_p_inoc_scaffold_3683_3
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1726..2304
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037495A7 rbh
putative type 4 fimbrial biogenesis related transmembrane protein; K02671 type IV pilus assembly protein PilV Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
type 4 fimbrial biogenesis protein
scnpilot_p_inoc_scaffold_3683_4
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2307..3398
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003687830 rbh
type 4 fimbrial biogenesis PilW-like protein transmembrane; K02672 type IV pilus assembly protein PilW Tax=CG_Beta_01
pilW; type IV pilus assembly protein PilW
scnpilot_p_inoc_scaffold_3683_5
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3395..3889
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374E8E7 rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3683_6
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3916..6996
DNA (3081bp) protein (1027aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D47BE rbh
hypothetical protein Tax=CG_Beta_01
hypothetical protein
scnpilot_p_inoc_scaffold_3683_7
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7062..7544
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EE14E rbh
methylation Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
Prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_p_inoc_scaffold_3683_8
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7856..8395
DNA (540bp) protein (180aa)
methylation; K08084 type IV fimbrial biogenesis protein FimT Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Methylation id=1333522 bin=GWE1_T_denit_62_9 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
methylation
scnpilot_p_inoc_scaffold_3683_9
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8568..8774)
DNA (207bp) protein (69aa)
Uncharacterized protein n=3 Tax=Xylella fastidiosa RepID=Q9PBV6_XYLFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETE33195.1}; TaxID=1214121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa 32
scnpilot_p_inoc_scaffold_3683_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8981..9838)
DNA (858bp) protein (286aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=GWE1_Thiobacillus_62_9_curated
4-hydroxy-3-methylbut-2-enyl diphosphate reductase id=1333521 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
scnpilot_p_inoc_scaffold_3683_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9852..10022)
DNA (171bp) protein (57aa)
putative FKBP-type peptidyl-prolyl cis-trans isomerase 2; K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E8C6E
FKBP-type peptidyl-prolyl cis-trans isomerase 2
Displaying 11 items

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