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scnpilot_p_inoc_scaffold_2497

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2497_1
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..232)
DNA (231bp) protein (77aa)
DNA polymerase beta-like protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTQ1_PSEUP
DNA polymerase beta-like protein
DNA polymerase beta-like protein {ECO:0000313|EMBL:AER56154.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Ps
scnpilot_p_inoc_scaffold_2497_2
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(294..710)
DNA (417bp) protein (139aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036064FB
PilT protein domain-containing protein
scnpilot_p_inoc_scaffold_2497_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(716..955)
DNA (240bp) protein (80aa)
SpoVT/AbrB like domain protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTK2_9GAMM
SpoVT/AbrB like domain-containing protein
SpoVT/AbrB like domain protein {ECO:0000313|EMBL:CDQ09956.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" sourc
scnpilot_p_inoc_scaffold_2497_4
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1137..1694)
DNA (558bp) protein (186aa)
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EGV27652.1}; EC=2.4.1.187 {ECO:0000313|EMBL:EGV27652.1};; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiale
UDP-N-acetyl-D-mannosaminuronic acid transferase (EC:2.4.1.187)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FF036
scnpilot_p_inoc_scaffold_2497_5
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1842..2990)
DNA (1149bp) protein (383aa)
Glycosyltransferase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NB99_9BURK rbh
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGX87444.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR.;"
scnpilot_p_inoc_scaffold_2497_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3033..3866)
DNA (834bp) protein (278aa)
methyltransferase, putative id=1334898 bin=GWE1_T_denit_62_9 species=Citromicrobium bathyomarinum genus=Citromicrobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
methyltransferase, putative Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_scaffold_2497_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3897..5105)
DNA (1209bp) protein (403aa)
Glycosyltransferase, putative id=1334897 bin=GWE1_T_denit_62_9 species=Ricinus communis genus=Ricinus taxon_order=Malpighiales taxon_class=unknown phylum=Streptophyta tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycosyltransferase, putative Tax=GWE1_Thiobacillus_62_9_curated
glycosyltransferase
scnpilot_p_inoc_scaffold_2497_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5102..7012)
DNA (1911bp) protein (637aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJD3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70154.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacter
hemolysin-type calcium-binding protein
scnpilot_p_inoc_scaffold_2497_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6990..8090)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D3548
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACB34608.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC
scnpilot_p_inoc_scaffold_2497_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8087..8851)
DNA (765bp) protein (255aa)
Putative glycosyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJC6_9BURK
Putative glycosyltransferase {ECO:0000313|EMBL:EHR70147.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
family 2 glycosyl transferase
scnpilot_p_inoc_scaffold_2497_11
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8848..10041)
DNA (1194bp) protein (398aa)
glycosyltransferase (EC:2.4.-.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037AFB3D rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU80716.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
scnpilot_p_inoc_scaffold_2497_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10048..11556)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036F0331 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF79823.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;
polysaccharide biosynthesis protein
scnpilot_p_inoc_scaffold_2497_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11553..13040)
DNA (1488bp) protein (496aa)
Lipid A core-O-antigen ligase-like enyme n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJC5_9BURK
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:EHR70146.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiale
scnpilot_p_inoc_scaffold_2497_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13160..13480)
DNA (321bp) protein (107aa)
GDP-L-fucose synthetase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=GWE1_Thiobacillus_62_9_curated
GDP-L-fucose synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036144F1
GDP-L-fucose synthetase
scnpilot_p_inoc_scaffold_2497_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13456..13842)
DNA (387bp) protein (129aa)
GDP-L-fucose synthetase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=GWE1_Thiobacillus_62_9_curated
GDP-L-fucose synthetase id=1295753 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
GDP-L-fucose synthetase
scnpilot_p_inoc_scaffold_2497_16
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14076..14429)
DNA (354bp) protein (118aa)
hypothetical protein id=12497714 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL55301.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferr
scnpilot_p_inoc_scaffold_2497_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14474..15964)
DNA (1491bp) protein (497aa)
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=GWE1_Thiobacillus_62_9_curated
GDP-mannose 4,6-dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003744ED4
GDP-mannose 4,6-dehydratase
scnpilot_p_inoc_scaffold_2497_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15980..16879)
DNA (900bp) protein (300aa)
exosortase 2 n=1 Tax=Thiobacillus thioparus RepID=UPI0003733062 rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein rbh
scnpilot_p_inoc_scaffold_2497_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16884..17246)
DNA (363bp) protein (121aa)
chain-length determining protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037425E0
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
Displaying 19 items

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