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scnpilot_p_inoc_scaffold_236

Search features with annotation key words

Displaying items 31-60 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_236_31
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


20533..20886
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIR0_FLUTR
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="F
scnpilot_p_inoc_scaffold_236_32
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


20896..21411
DNA (516bp) protein (172aa)
30S ribosomal protein S5 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIQ9_FLUTR
30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
30S ribosomal protein S5
scnpilot_p_inoc_scaffold_236_33
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


21423..21599
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIQ8_FLUTR
50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
50S ribosomal protein L30
scnpilot_p_inoc_scaffold_236_34
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


21618..22064
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II64_FLUTR
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.
scnpilot_p_inoc_scaffold_236_35
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


22090..23445
DNA (1356bp) protein (452aa)
Protein translocase subunit SecY n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II63_FLUTR rbh
protein translocase subunit secY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
protein translocase subunit secY/sec61 alpha
scnpilot_p_inoc_scaffold_236_36
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23449..23667
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II62_FLUTR
translation initiation factor 1 (bIF-1); K02518 translation initiation factor IF-1 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
translation initiation factor 1 (bIF-1)
scnpilot_p_inoc_scaffold_236_37
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23676..23792
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II61_FLUTR
50S ribosomal protein L36P; K02919 large subunit ribosomal protein L36 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
50S ribosomal protein L36
scnpilot_p_inoc_scaffold_236_38
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


23806..24180
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II60_FLUTR
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis
scnpilot_p_inoc_scaffold_236_39
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists


24197..24583
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II59_FLUTR
30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
30S ribosomal protein S11
scnpilot_p_inoc_scaffold_236_40
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


24638..25246
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II58_FLUTR rbh
30S ribosomal protein S4P; K02986 small subunit ribosomal protein S4 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
30S ribosomal protein S4
scnpilot_p_inoc_scaffold_236_41
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25263..26255
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II57_FLUTR rbh
scnpilot_p_inoc_scaffold_236_42
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


26277..26816
DNA (540bp) protein (180aa)
50S ribosomal protein L17 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II56_FLUTR
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.
scnpilot_p_inoc_scaffold_236_43
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26902..28005
DNA (1104bp) protein (368aa)
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II55_FLUTR rbh
scnpilot_p_inoc_scaffold_236_44
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28002..29282
DNA (1281bp) protein (427aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II54_FLUTR rbh
scnpilot_p_inoc_scaffold_236_45
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29327..30814
DNA (1488bp) protein (496aa)
Putative uncharacterized protein id=1825812 bin=GWE2_Bacteroidetes_42_42 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_p_inoc_scaffold_236_46
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30857..32872
DNA (2016bp) protein (672aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
Urocanate hydratase n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1HAG4_9FLAO
urocanate hydratase
scnpilot_p_inoc_scaffold_236_47
unknown

Not on your lists

comp(32928..33173)
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_236_48
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33222..36167)
DNA (2946bp) protein (982aa)
Signal transduction histidine kinase, LytS n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9S9_FLUTR rbh
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:AEA43075.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola
scnpilot_p_inoc_scaffold_236_49
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36164..36940)
DNA (777bp) protein (259aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9S8_FLUTR rbh
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEA43074.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae;
scnpilot_p_inoc_scaffold_236_50
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37074..37841)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA99_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
scnpilot_p_inoc_scaffold_236_51
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(37950..38306)
DNA (357bp) protein (119aa)
50S ribosomal protein L19 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKE7_FLUTR
50S ribosomal protein L19P; K02884 large subunit ribosomal protein L19 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
50S ribosomal protein L19
scnpilot_p_inoc_scaffold_236_52
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38408..39574)
DNA (1167bp) protein (389aa)
Proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Proline dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2III0_FLUTR rbh
proline dehydrogenase
scnpilot_p_inoc_scaffold_236_53
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

39649..40737
DNA (1089bp) protein (363aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2III1_FLUTR rbh
scnpilot_p_inoc_scaffold_236_54
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(40751..41218)
DNA (468bp) protein (156aa)
UPI0003D5CD2E related cluster n=1 Tax=unknown RepID=UPI0003D5CD2E
Uncharacterized protein {ECO:0000313|EMBL:CEG26159.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
hypothetical protein
scnpilot_p_inoc_scaffold_236_55
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(41218..41985)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIJ0_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_236_56
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42093..42284)
DNA (192bp) protein (64aa)
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Cold-shock DNA-binding protein family id=4290999 bin=GWC2_Bacteroidetes_33_15 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good +
cold-shock DNA-binding protein family
scnpilot_p_inoc_scaffold_236_57
unknown

Not on your lists

42475..43137
DNA (663bp) protein (221aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_236_58
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43134..43607
DNA (474bp) protein (158aa)
CMP/dCMP deaminase zinc-binding protein; K01489 cytidine deaminase [EC:3.5.4.5] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK97_FLUTR
CMP/dCMP deaminase zinc-binding protein
scnpilot_p_inoc_scaffold_236_59
uncultured Flavobacteriia bacterium, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43604..44392
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RGX7_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CCG00288.1}; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samples.;" source="uncultured Flavobacteriia bacterium.;"
scnpilot_p_inoc_scaffold_236_60
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44395..46503
DNA (2109bp) protein (703aa)
Tex-like protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC94_FLUTR rbh
Tex-like protein; K06959 uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Tex-like protein
Displaying items 31-60 of 138 in total

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