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scnpilot_p_inoc_scaffold_236_56

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(42093..42284)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 63.0
  • Bit_score: 108
  • Evalue 5.00e-21
Cold-shock DNA-binding protein family id=4290999 bin=GWC2_Bacteroidetes_33_15 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 64.0
  • Bit_score: 105
  • Evalue 1.80e-20
cold-shock DNA-binding protein family similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 63.0
  • Bit_score: 104
  • Evalue 1.50e-20

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Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 192
ATGTATAAAGGTAAAGTAAAATTCTTTAATGAGACCAAAGGTTTCGGATTCATTAAGGATGAAGATTCAAACAAAGAATATTTTGTTCATATCTCTGGTTTGGTTGACAAAATCGATCAGGATGACGAAGTAACTTTTGAACTTCAAGAAGGCAAAAAAGGTTTAATTGCAGTAAACGTAAAACAAGCATAA
PROTEIN sequence
Length: 64
MYKGKVKFFNETKGFGFIKDEDSNKEYFVHISGLVDKIDQDDEVTFELQEGKKGLIAVNVKQA*