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scnpilot_p_inoc_scaffold_558

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_558_1
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..3408)
DNA (3408bp) protein (1136aa)
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
PDK repeat-containing protein id=4045200 bin=GWF2_Bacteroidetes_38_335 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
CUB domain protein
scnpilot_p_inoc_scaffold_558_2
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3814..5193)
DNA (1380bp) protein (460aa)
NAD(P)H-quinone oxidoreductase subunit 2 (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
NAD(P)H-quinone oxidoreductase subunit 2 (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR7_FLUTR rbh
scnpilot_p_inoc_scaffold_558_3
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5199..6635)
DNA (1437bp) protein (479aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR6_FLUTR rbh
scnpilot_p_inoc_scaffold_558_4
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6641..8563)
DNA (1923bp) protein (641aa)
NADH dehydrogenase subunit L (EC:1.6.5.3); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
NADH dehydrogenase subunit L (EC:1.6.5.3)
NADH dehydrogenase subunit L n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR5_FLUTR rbh
scnpilot_p_inoc_scaffold_558_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8569..8895)
DNA (327bp) protein (109aa)
NADH dehydrogenase subunit K (EC:1.6.5.3); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
NADH dehydrogenase subunit K (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR4_FLUTR
scnpilot_p_inoc_scaffold_558_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8895..9404)
DNA (510bp) protein (170aa)
NADH dehydrogenase subunit J (EC:1.6.5.3); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
NADH dehydrogenase subunit J (EC:1.6.5.3)
NADH dehydrogenase subunit J n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR3_FLUTR
scnpilot_p_inoc_scaffold_558_7
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9401..9943)
DNA (543bp) protein (181aa)
NADH dehydrogenase subunit I (EC:1.6.5.3); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR2_FLUTR rbh
scnpilot_p_inoc_scaffold_558_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9961..10992)
DNA (1032bp) protein (344aa)
NADH dehydrogenase subunit H (EC:1.6.5.3); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
NADH dehydrogenase subunit H (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit H n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR1_FLUTR rbh
scnpilot_p_inoc_scaffold_558_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10992..11960)
DNA (969bp) protein (323aa)
NADH dehydrogenase subunit G (EC:1.6.5.3); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
NADH dehydrogenase subunit G (EC:1.6.5.3)
NADH dehydrogenase subunit G n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJR0_FLUTR rbh
scnpilot_p_inoc_scaffold_558_10
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11982..13319)
DNA (1338bp) protein (446aa)
NADH dehydrogenase subunit F (EC:1.6.5.3)
NADH dehydrogenase subunit F {ECO:0000313|EMBL:AEA43949.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEA43949.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae;
NADH dehydrogenase subunit F n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ9_FLUTR rbh
scnpilot_p_inoc_scaffold_558_11
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13326..13853)
DNA (528bp) protein (176aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH dehydrogenase subunit E {ECO:0000313|EMBL:AEA43948.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEA43948.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae;
NADH dehydrogenase subunit E n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ8_FLUTR
scnpilot_p_inoc_scaffold_558_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13857..15080)
DNA (1224bp) protein (408aa)
NADH dehydrogenase subunit D (EC:1.6.5.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ7_FLUTR rbh
scnpilot_p_inoc_scaffold_558_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15083..15595)
DNA (513bp) protein (171aa)
NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH dehydrogenase subunit C {ECO:0000313|EMBL:AEA43946.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEA43946.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae;
NADH dehydrogenase subunit C n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ6_FLUTR
scnpilot_p_inoc_scaffold_558_14
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15582..16148)
DNA (567bp) protein (189aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ5_FLUTR rbh
scnpilot_p_inoc_scaffold_558_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16136..16546)
DNA (411bp) protein (137aa)
NADH dehydrogenase subunit A (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJQ4_FLUTR
scnpilot_p_inoc_scaffold_558_16
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(16722..17720)
DNA (999bp) protein (333aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBD7_FLUTR rbh
scnpilot_p_inoc_scaffold_558_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17970..19202
DNA (1233bp) protein (411aa)
Imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICV4_FLUTR rbh
scnpilot_p_inoc_scaffold_558_18
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19298..20500
DNA (1203bp) protein (401aa)
GumN family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICV3_FLUTR
GumN family protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
GumN family protein
scnpilot_p_inoc_scaffold_558_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20515..20934)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003650CA1
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
scnpilot_p_inoc_scaffold_558_20
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

21058..22185
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICV2_FLUTR rbh
hypothetical protein; K07133 Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_558_21
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22187..23629
DNA (1443bp) protein (481aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:AEA43394.1}; EC=1.2.1.8 {ECO:0000313|EMBL:AEA43394.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae
Betaine-aldehyde dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDM1_FLUTR rbh
scnpilot_p_inoc_scaffold_558_22
unknown

Not on your lists

23635..24231
DNA (597bp) protein (199aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_558_23
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24273..24971)
DNA (699bp) protein (233aa)
Transcriptional regulator, TetR family n=2 Tax=Marinobacter RepID=E4PNP7_MARAH
Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR {ECO:0000313|EMBL:CEJ71084.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriace
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_558_24
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24998..25291
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:AEE53288.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
scnpilot_p_inoc_scaffold_558_25
unknown

Not on your lists

25304..25534
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_558_26
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25797..26399)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XE75_CELAD
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
scnpilot_p_inoc_scaffold_558_27
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26514..27317)
DNA (804bp) protein (268aa)
type 12 methyltransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374C6E7 rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EHQ01842.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15
methyltransferase type 11
scnpilot_p_inoc_scaffold_558_28
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27712..27966)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDF0_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42326.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (stra
scnpilot_p_inoc_scaffold_558_29
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(28095..28568)
DNA (474bp) protein (158aa)
TspO and MBR like protein id=4290158 bin=GWF2_Bacteroidetes_43_63 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
tryptophan-rich sensory protein
Tax=BJP_IG2102_Bacteroidetes_40_12
scnpilot_p_inoc_scaffold_558_30
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28676..28912)
DNA (237bp) protein (79aa)
excinuclease ABC subunit C n=1 Tax=Marinilabilia salmonicolor RepID=UPI000299DEBC
excinuclease ABC C subunit domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
excinuclease ABC C subunit domain-containing protein
Displaying items 1-30 of 61 in total

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