ggKbase home page

scnpilot_p_inoc_scaffold_950

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_950_1
unknown

Not on your lists

comp(475..1908)
DNA (1434bp) protein (478aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_2
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1974..2540
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGL3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42619.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (stra
scnpilot_p_inoc_scaffold_950_3
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(2643..3677)
DNA (1035bp) protein (345aa)
Protein RecA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGN3_FLUTR rbh
Protein recA; K03553 recombination protein RecA Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
recombinase A
scnpilot_p_inoc_scaffold_950_4
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3739..4209)
DNA (471bp) protein (157aa)
Peroxiredoxin n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNY1_CHIPD
Thiol peroxidase {ECO:0000313|EMBL:KFD39535.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Y
peroxiredoxin
scnpilot_p_inoc_scaffold_950_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4526..6607)
DNA (2082bp) protein (694aa)
OmpA/MotB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C8_FLUTR rbh
OmpA/MotB domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
OmpA/MotB domain-containing protein
scnpilot_p_inoc_scaffold_950_6
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(6746..7777)
DNA (1032bp) protein (344aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C7_FLUTR rbh
scnpilot_p_inoc_scaffold_950_7
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(7830..8135)
DNA (306bp) protein (102aa)
FeS assembly SUF system protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9A5_FLUTR
FeS assembly SUF system protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
FeS assembly SUF system protein
scnpilot_p_inoc_scaffold_950_8
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8132..8557)
DNA (426bp) protein (142aa)
Cysteine desulfuration protein SufE n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9A6_FLUTR
cysteine desulfurase
Cysteine desulfuration protein SufE {ECO:0000313|EMBL:AEA44063.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taf
scnpilot_p_inoc_scaffold_950_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8557..9792)
DNA (1236bp) protein (412aa)
cysteine desulfurase (EC:2.8.1.7 4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9A7_FLUTR rbh
scnpilot_p_inoc_scaffold_950_10
unknown

Not on your lists

comp(9984..10700)
DNA (717bp) protein (239aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_11
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10930..11688
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKC4_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44027.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
scnpilot_p_inoc_scaffold_950_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11691..12896
DNA (1206bp) protein (402aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Tax=RIFCSPHIGHO2_02_FULL_Fl
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKC5_FLUTR rbh
3-deoxy-D-manno-octulosonic-acid transferase
scnpilot_p_inoc_scaffold_950_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12988..16284)
DNA (3297bp) protein (1099aa)
PKD domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
PKD domain containing protein id=4534882 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
PKD domain-containing protein
scnpilot_p_inoc_scaffold_950_14
Fervidobacterium pennivorans, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

16430..16660
DNA (231bp) protein (77aa)
Fe2+ transport system protein A n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UBL5_FERPD
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:AFG34908.1}; TaxID=771875 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium pennivorans
scnpilot_p_inoc_scaffold_950_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16653..18572
DNA (1920bp) protein (640aa)
Ferrous iron transport protein B n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF43_FLUTR rbh
ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:AEA43517.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffen
scnpilot_p_inoc_scaffold_950_16
unknown

Not on your lists

18572..18682
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_17
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

18878..21238
DNA (2361bp) protein (787aa)
Copper-exporting P-type ATPase A (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Copper-exporting ATPase (EC:3.6.3.4)
Copper-exporting ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH9_FLUTR rbh
scnpilot_p_inoc_scaffold_950_18
unknown

Not on your lists

comp(21203..21337)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_19
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21525..23753
DNA (2229bp) protein (743aa)
cytochrome c oxidase, cbb3-type subunit I (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:AEA45102.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AEA45102.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cr
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH6_FLUTR rbh
scnpilot_p_inoc_scaffold_950_20
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23759..23962
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45101.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
scnpilot_p_inoc_scaffold_950_21
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

23967..25112
DNA (1146bp) protein (382aa)
Cytochrome c class I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH4_FLUTR rbh
cytochrome c class I; K00406 cytochrome c oxidase cbb3-type subunit III Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
cytochrome c class I
scnpilot_p_inoc_scaffold_950_22
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

25126..26520
DNA (1395bp) protein (465aa)
Cytochrome c oxidase accessory protein CcoG n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH3_FLUTR rbh
cytochrome c oxidase accessory protein CcoG Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
cytochrome c oxidase accessory protein CcoG
scnpilot_p_inoc_scaffold_950_23
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

26532..26951
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH2_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_950_24
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26954..27700
DNA (747bp) protein (249aa)
membrane protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248EBC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45097.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
scnpilot_p_inoc_scaffold_950_25
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

27745..28461
DNA (717bp) protein (239aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKI1_FLUTR
Crp/Fnr family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_950_26
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28551..30134
DNA (1584bp) protein (528aa)
Glutamate synthase family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRE3_SOLCM
glutamate synthase family protein
Glutamate synthase family protein {ECO:0000313|EMBL:AFD07468.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.
scnpilot_p_inoc_scaffold_950_27
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30175..30609
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flav
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CER2_9FLAO
fklB; peptidyl-prolyl cis/trans isomerase
scnpilot_p_inoc_scaffold_950_28
unknown

Not on your lists

comp(30760..31308)
DNA (549bp) protein (183aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_29
unknown

Not on your lists

comp(31322..31885)
DNA (564bp) protein (188aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_30
unknown

Not on your lists

comp(31875..31988)
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

View Taxonomy