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scnpilot_p_inoc_scaffold_296

Search features with annotation key words

Displaying items 31-60 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_296_31
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24826..25998)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RH25_PSEPU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN83381.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putid
scnpilot_p_inoc_scaffold_296_32
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26010..27149)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0003028D70 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN83380.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putid
scnpilot_p_inoc_scaffold_296_33
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27151..27912)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Pseudomonas putida RepID=UPI00031BDDD9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN83379.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putid
scnpilot_p_inoc_scaffold_296_34
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27924..28973)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N7A368_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO98734.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.
hypothetical protein
scnpilot_p_inoc_scaffold_296_35
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28966..29505)
DNA (540bp) protein (180aa)
hypothetical protein n=2 Tax=Xanthomonas axonopodis RepID=UPI000366E3A5
icmW; IcmW
Type IV secretion protein IcmW {ECO:0000313|EMBL:AJA14264.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
scnpilot_p_inoc_scaffold_296_36
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29586..36587)
DNA (7002bp) protein (2334aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI000360F4A0 rbh
Helicase. putatve {ECO:0000313|EMBL:ABS45735.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotubercul
helicase rbh
scnpilot_p_inoc_scaffold_296_37
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36672..37964)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI000367F8A7 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS45723.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotu
scnpilot_p_inoc_scaffold_296_38
unknown

Not on your lists

37995..38207
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_296_39
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38308..39534
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00030EA050 rbh
plasmid replication protein
Putative plasmid replication protein {ECO:0000313|EMBL:CAH37283.1}; TaxID=272560 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei gr
scnpilot_p_inoc_scaffold_296_40
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40441..41271
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z5Y2_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73110.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27
scnpilot_p_inoc_scaffold_296_41
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41268..41531
DNA (264bp) protein (88aa)
Putative endonuclease n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G583_STEMA
excinuclease ABC subunit C
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:ADV26429.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" so
scnpilot_p_inoc_scaffold_296_42
BDI, BDI, BDI, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41521..42309
DNA (789bp) protein (263aa)
id=12553781 bin=BDI tax=BDI organism_group=Betaproteobacteria
id=12553781 bin=BDI tax=BDI organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_296_43
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42306..43106
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00030D9E91 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGB99111.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;"
scnpilot_p_inoc_scaffold_296_44
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43171..43794
DNA (624bp) protein (208aa)
DNA-binding protein KrfA n=1 Tax=Thauera phenylacetica B4P RepID=N6ZWF0_9RHOO rbh
DNA-binding protein KrfA {ECO:0000313|EMBL:ENO98698.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P
DNA-binding protein KrfA rbh
scnpilot_p_inoc_scaffold_296_45
unknown

Not on your lists

43826..44038
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_296_46
unknown

Not on your lists

44050..44433
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI000366B64D
scnpilot_p_inoc_scaffold_296_47
unknown

Not on your lists

comp(44409..44735)
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_296_48
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44772..45509)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0ANF2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14404.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
signal transduction protein
scnpilot_p_inoc_scaffold_296_49
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45710..46621)
DNA (912bp) protein (304aa)
Putative Spermidine synthase {ECO:0000313|EMBL:CDI04353.1}; EC=2.5.1.16 {ECO:0000313|EMBL:CDI04353.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candid
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00031879B1 rbh
spermine/spermidine synthase family protein 2
scnpilot_p_inoc_scaffold_296_50
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46600..47235)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E55F69
hypothetical protein Tax=GWC2_Geobacteraceae_58_44_curated
hypothetical protein
scnpilot_p_inoc_scaffold_296_51
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47232..47750)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Xylella fastidiosa (strain M12) RepID=B0U2D8_XYLFM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
scnpilot_p_inoc_scaffold_296_52
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47761..48321)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5A9B6_BURGB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR29481.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gluma
scnpilot_p_inoc_scaffold_296_53

Not on your lists

comp(48306..49601)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Escherichia coli JJ1886 RepID=U5SSB6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KKM91807.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_296_54
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49623..49922)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS66588.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
hypothetical protein
scnpilot_p_inoc_scaffold_296_55
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50000..50455)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00031C0B75
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1437825 species="Bacteria; Proteobacteria; Gam
ssb; single-stranded DNA-binding protein
scnpilot_p_inoc_scaffold_296_56
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50472..51017)
DNA (546bp) protein (182aa)
Putative conjugal transfer protein TrbN n=1 Tax=Pseudomonas putida (strain BIRD-1) RepID=E4R699_PSEPB
Putative conjugal transfer protein TrbN
Conjugal transfer protein TrbN {ECO:0000313|EMBL:AJA14233.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
scnpilot_p_inoc_scaffold_296_57
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51017..51634)
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Pseudomonas putida RepID=E4R6A0_PSEPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA14232.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putid
scnpilot_p_inoc_scaffold_296_58
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51718..54411)
DNA (2694bp) protein (898aa)
putative type IV secretion system protein IcmO/DotL; K12217 intracellular multiplication protein IcmO id=12553743 bin=BDI species=Xanthomonas axonopodis genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
putative type IV secretion system protein IcmO/DotL
Putative type IV secretion system protein IcmO/DotL {ECO:0000313|EMBL:ABS45767.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.
scnpilot_p_inoc_scaffold_296_59
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54432..57494)
DNA (3063bp) protein (1021aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI000313E1F2 rbh
Putative type IV secretion system protein IcmB/DotO rbh
Type IV secretion protein DotO {ECO:0000313|EMBL:AJA14230.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
scnpilot_p_inoc_scaffold_296_60
unknown

Not on your lists

comp(57484..57693)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying items 31-60 of 129 in total

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