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scnpilot_p_inoc_scaffold_296_35

Organism: SCNpilot_P_inoc_Plasmid-like_61_9

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(28966..29505)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=2 Tax=Xanthomonas axonopodis RepID=UPI000366E3A5 similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 160.0
  • Bit_score: 217
  • Evalue 1.60e-53
icmW; IcmW similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 165.0
  • Bit_score: 185
  • Evalue 1.80e-44
Type IV secretion protein IcmW {ECO:0000313|EMBL:AJA14264.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 165.0
  • Bit_score: 185
  • Evalue 7.00e-44

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCTGGATTCAACTGCGCAAGCAAGCACAAGCGACTTGAAAGGCGTCCCGATCCCTGAGATCGAGACGCTTGATCTCACGTCGCATAGCGTTCTGGCCCACTTCGCGAAATCGACGCGGAATGTGCAACTGCTCAACTTCCTGTTGGCGCTGGATCGCGTCGATAAGTGGGCGGTGGACTACAACGAGTCGGAGTCGCCGAAGGCGCTGGAAATCCAGCTTTTCGTGCAAGACCTGCAACGCTTCGTCGAGGCGAGCTTGCCGGTCTTGCACCGCGTTCCTCGCGAATTTGCGGACATCCTGTGTCACCTGACGACAACGCGGTGCATGTACCTGATTCGGTTCGTGGGTCAGCACAACGAGGAATTTTTGGAACGGCTGGGCTTCCTGCTGGAAGAAGAGGCCGGACAATCACCCAATGTCGCAGCCGTCAGGCGGCGTTTGGAAGCGTTCAGCAAGGCGAAACTACTGGGGGAAATCTTTTCCGGGAAGCGCCTGACTCGCATTTTGCAGATCATGGGGAGTTATTCAGATGTTTAA
PROTEIN sequence
Length: 180
MLDSTAQASTSDLKGVPIPEIETLDLTSHSVLAHFAKSTRNVQLLNFLLALDRVDKWAVDYNESESPKALEIQLFVQDLQRFVEASLPVLHRVPREFADILCHLTTTRCMYLIRFVGQHNEEFLERLGFLLEEEAGQSPNVAAVRRRLEAFSKAKLLGEIFSGKRLTRILQIMGSYSDV*