ggKbase home page

scnpilot_p_inoc_scaffold_1433_5

Organism: SCNpilot_P_inoc_Chimera

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 6417..8168

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein, Csd1 family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ7_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 583.0
  • Bit_score: 710
  • Evalue 1.90e-201
  • rbh
CRISPR-associated protein Csd1 family similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 583.0
  • Bit_score: 710
  • Evalue 5.40e-202
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:ACX95670.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 583.0
  • Bit_score: 710
  • Evalue 2.70e-201

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1752
ATGATCCTGCAAGCCCTGAACGACTACTACCGCCGCAAGTGCGACGACCCCGACCCGGCGCAGCGTCTGCCTGCCTTTGGGCTGGAGCAGAAGGAGATTCCGTTCATCCTGGAGATCGATGCCGACGGAGAGCTGCTGCAACTGCGCGACACCCGTGAACAGCAAGGCAAAAAGAAGGTGGCGCGCATCTTTCGCGTGCCCATGGGCGTCAAGAAAACCTCGGGCGTGGCGGCCAACCTGCTGTGGGACACCCTGGAATACGTGCTGGGCGTGGACACCAAGGGCAAGCCCGAGCGCGTGGCCGAGCAGCATGCGGCGTTCCGTGCCCGTATCGAGGCGCTGCCAGAGACGGTCAGGGAGGATGCCGGCATCCAGGCCGTGCTGCGCTTTCTGCAACGGCGGGATGTGGCGCAACTGGAGCGCCAGCCTGCCTGGAGCGAGGCGCTGGAGGGCAACGCCGTGATGAGCTTCCGGCTGCATGGCGACCTGGACCTGGTGTGCCAGCGCCACGCCGTGGTGCAGGCGGCGCTGAATACGAGCGGCGACGATGATGCGCCGCAGGCCATGTGCCTGGTGACGGGCGAGCAGGCGCCAGTGGAGCGTCTGCATGCCTCGATCAAAGGGGTGTGGGGTGCGCAGACCTCTGGCGCCAACATCGTCTCGTTCAACGCCCGCGCCTTCGAGTCGTATGGCAAGACCGAGCGCCAGGGCGAAAACGCTCCGGTCGGCCGCGCCGCCGCCTTTGCCTACACCACGGCGCTGAACCATCTGCTGCGCAAGGACTCGCCCCAGCGCATGCAGGTGGGCGATGCGTCCACGGTGTTCTGGGCCGAGCGGCAAGACCCGTTCGAGACCATCTTTGGCGACATCTTCCAGGACAACCCCGACGACAGCACCGCCGCCGTGCGCGCGCTGCTCGATGCCGTGCACAGCGGCCAGTGGGGGCCGTCGGATGAAAACCTGCGCTACCACGTGCTGGGCCTGGCGCCCAACGCGGCGCGCATCAGCATCCGCTTCTACCACTGCGTCACCCTGCGCGAACTGGGCCAGCGCATCGCGCAGCACTTCGAAGACCTGTCGCTGGCGCGGGGGCCGAATGACCCGCAGTACCCATCGCTCTTTCGCCTGCTGACGGCGGTGGCGTTGCAGAACAAGGCCGACAACATTCCGCCCAACCTGGGCGGCGCCATCGTCGATGCCCTGCTGGCCGGGCCGGATGCGCCCTATCCCCGCCTGTGGCTCAACGCCGCCGTGGGCCGCTGCCGGGCGGAGCAAGCCGTCAATTACCTGCGCGCTGCGGCCATCAAGGCGTGCCTCAACCGTCATATCCGTTTTCGCCACGGCACAGAAAAGGAGTTTTTGCCCATGCTCGACCTCAGCAACACCCATCCGGCCTACCGGCTGGGGCGGCTCTTTGCGGTGCTGGAAAAAATCCAGGAAGAAGCCAGCCCCGGCCTGAACGCCACCATCCGCGACAGGTACTACGGCGCGGCTTCCAGCACGCCGGTGGCGGTGTTCACCACCTTGCTGCGCCTGAAGAACGCGCACCTCAAGAAGCTGGTGCCAGGGCGTGTGGCCTGGTTTGAAAAGCTGCTGGGTGAAGTGCTGGGCCCGGTGAACGACTTCCCCAGGCATCTGCCATTGCCCGACCAGGGCCGCTTCGCGCTGGGCTACTACCACCAGCGGCAGGACTTTTTCACCCGCAAATCCCAAGACATCGACCCCGGCACCCCTGAAGGAGAAACCGCATGA
PROTEIN sequence
Length: 584
MILQALNDYYRRKCDDPDPAQRLPAFGLEQKEIPFILEIDADGELLQLRDTREQQGKKKVARIFRVPMGVKKTSGVAANLLWDTLEYVLGVDTKGKPERVAEQHAAFRARIEALPETVREDAGIQAVLRFLQRRDVAQLERQPAWSEALEGNAVMSFRLHGDLDLVCQRHAVVQAALNTSGDDDAPQAMCLVTGEQAPVERLHASIKGVWGAQTSGANIVSFNARAFESYGKTERQGENAPVGRAAAFAYTTALNHLLRKDSPQRMQVGDASTVFWAERQDPFETIFGDIFQDNPDDSTAAVRALLDAVHSGQWGPSDENLRYHVLGLAPNAARISIRFYHCVTLRELGQRIAQHFEDLSLARGPNDPQYPSLFRLLTAVALQNKADNIPPNLGGAIVDALLAGPDAPYPRLWLNAAVGRCRAEQAVNYLRAAAIKACLNRHIRFRHGTEKEFLPMLDLSNTHPAYRLGRLFAVLEKIQEEASPGLNATIRDRYYGAASSTPVAVFTTLLRLKNAHLKKLVPGRVAWFEKLLGEVLGPVNDFPRHLPLPDQGRFALGYYHQRQDFFTRKSQDIDPGTPEGETA*