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scnpilot_p_inoc_scaffold_1433

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1433_1
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1098
DNA (1098bp) protein (366aa)
methyl-accepting chemotaxis protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B3D6CB
Methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACO75794.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source
scnpilot_p_inoc_scaffold_1433_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1160..3379)
DNA (2220bp) protein (740aa)
Helicase c2 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDD4_ACISJ rbh
dinG; ATP-dependent DNA helicase DinG
Helicase c2 {ECO:0000313|EMBL:ABM44259.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_1433_3

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3505..5754
DNA (2250bp) protein (750aa)
CRISPR-associated helicase Cas3 n=1 Tax=mine drainage metagenome RepID=E6PND0_9ZZZZ
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:CBH96432.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CRISPR-associated helicase Cas3
scnpilot_p_inoc_scaffold_1433_4
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5764..6420
DNA (657bp) protein (219aa)
CRISPR-associated protein Cas5 family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ8_HALNC
CRISPR-associated protein Cas5 family Tax=GWA2_Gallionellales_60_18_curated
CRISPR-associated protein Cas5 family
scnpilot_p_inoc_scaffold_1433_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6417..8168
DNA (1752bp) protein (584aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ7_HALNC rbh
CRISPR-associated protein Csd1 family
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:ACX95670.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source
scnpilot_p_inoc_scaffold_1433_6

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8165..9151
DNA (987bp) protein (329aa)
CRISPR-associated protein, Csd2 family protein n=1 Tax=mine drainage metagenome RepID=E6PND3_9ZZZZ rbh
CRISPR-associated protein, Csd2 family protein {ECO:0000313|EMBL:CBH96435.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
uncharacterized protein predicted to be involved in DNA repair
scnpilot_p_inoc_scaffold_1433_7
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9163..10023
DNA (861bp) protein (287aa)
prophage antirepressor id=12550124 bin=BDI species=Cellvibrio sp. BR genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
prophage antirepressor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
prophage antirepressor
scnpilot_p_inoc_scaffold_1433_8
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10028..10666
DNA (639bp) protein (213aa)
CRISPR-associated exonuclease, Cas4 family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RJ8_RHOFD rbh
CRISPR-associated Cas4 family protein
CRISPR-associated exonuclease, Cas4 family {ECO:0000313|EMBL:ABD71605.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rho
scnpilot_p_inoc_scaffold_1433_9
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10686..11714
DNA (1029bp) protein (343aa)
CRISPR-associated endonuclease Cas1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RJ7_RHOFD rbh
CRISPR-associated Cas1 family protein; K15342 CRISP-associated protein Cas1 Tax=CG_Rhodof_01
CRISPR-associated Cas1 family protein
scnpilot_p_inoc_scaffold_1433_10
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11727..12017
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RJ6_RHOFD
hypothetical protein Tax=CG_Rhodof_01
hypothetical protein
scnpilot_p_inoc_scaffold_1433_11
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12151..13164)
DNA (1014bp) protein (338aa)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_p_inoc_scaffold_1433_12
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15052..15873)
DNA (822bp) protein (274aa)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_p_inoc_scaffold_1433_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16050..17984
DNA (1935bp) protein (645aa)
Putative Methyl-accepting chemotaxis sensory transducer n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F672_9PROT
putative Methyl-accepting chemotaxis sensory transducer
Putative Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CDL00944.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnet
scnpilot_p_inoc_scaffold_1433_14
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17997..19073
DNA (1077bp) protein (359aa)
cheB3; Chemotaxis response regulator protein-glutamate methylesterase 3 (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099, ECO:0000313|EMBL:CDL00943.1};; TaxID=1430440 species="Ba
Chemotaxis response regulator protein-glutamate methylesterase 3 n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8G1_9PROT
scnpilot_p_inoc_scaffold_1433_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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19070..20560
DNA (1491bp) protein (497aa)
putative Protein methyltransferase frzF (EC:2.1.1.80)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6E5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00942.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_1433_16
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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20666..20929
DNA (264bp) protein (88aa)
putative gliding motility regulatory protein (EC:2.7.13.3)
Putative gliding motility regulatory protein {ECO:0000313|EMBL:CDL00941.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDL00941.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospiri
Putative gliding motility regulatory protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8M9_9PROT
Displaying 16 items

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