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scnpilot_p_inoc_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_57_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(299..3208)
DNA (2910bp) protein (970aa)
formate dehydrogenase subunit alpha n=1 Tax=Rudaea cellulosilytica RepID=UPI00037180DF rbh
Formate dehydrogenase {ECO:0000313|EMBL:KGI79013.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas sol
formate dehydrogenase
scnpilot_p_inoc_scaffold_57_2
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3251..4807)
DNA (1557bp) protein (519aa)
NAD-dependent formate dehydrogenase beta subunit {ECO:0000313|EMBL:EIZ02777.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EIZ02777.1};; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
NAD-dependent formate dehydrogenase beta subunit n=1 Tax=Ralstonia sp. PBA RepID=I9W2Y3_9RALS
NADH dehydrogenase
scnpilot_p_inoc_scaffold_57_3
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4804..5322)
DNA (519bp) protein (173aa)
fdsG; formate dehydrogenase subunit gamma (EC:1.2.1.2)
Formate dehydrogenase subunit gamma {ECO:0000313|EMBL:CBV41783.1}; EC=1.2.1.2 {ECO:0000313|EMBL:CBV41783.1};; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Ha
formate dehydrogenase subunit gamma n=1 Tax=Methylococcus capsulatus RepID=UPI000307AA1C
scnpilot_p_inoc_scaffold_57_4
unknown

Not on your lists

comp(5391..5849)
DNA (459bp) protein (153aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_57_5
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5997..6980)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C911A rbh
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AFC87424.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateur
scnpilot_p_inoc_scaffold_57_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6977..7957)
DNA (981bp) protein (327aa)
transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI00037A76AC
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHX15258.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensi
scnpilot_p_inoc_scaffold_57_7
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8183..11020
DNA (2838bp) protein (946aa)
formate dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B33440 rbh
formate dehydrogenase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_57_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11017..12783
DNA (1767bp) protein (589aa)
Sodium (Na+) symporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUH6_9GAMM rbh
Sodium (Na+) symporter {ECO:0000313|EMBL:EIL90867.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp
sodium (Na+) symporter
scnpilot_p_inoc_scaffold_57_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12780..13655
DNA (876bp) protein (292aa)
DMSO reductase subunit B (EC:1.2.4.2)
ferredoxin n=1 Tax=Martelella mediterranea RepID=UPI00035D21B5
Ferredoxin {ECO:0000313|EMBL:GAN44947.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.
scnpilot_p_inoc_scaffold_57_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13667..14722
DNA (1056bp) protein (352aa)
DMSO reductase anchor subunit (DmsC) n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2Y5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31199.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
DMSO reductase
scnpilot_p_inoc_scaffold_57_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14877..15644
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003610546
Putative salt-induced outer membrane protein {ECO:0000313|EMBL:EIL97048.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
putative salt-induced outer membrane protein
scnpilot_p_inoc_scaffold_57_12
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15779..16705)
DNA (927bp) protein (309aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003752DB7
porphobilinogen deaminase
scnpilot_p_inoc_scaffold_57_13
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16702..17436)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372FB21 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37533.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
putative two-component system response regulator
scnpilot_p_inoc_scaffold_57_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17433..18470)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365C61C
Histidine kinase {ECO:0000313|EMBL:GAN44951.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedi
histidine kinase
scnpilot_p_inoc_scaffold_57_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18508..19182)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A84CA
putative esterase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative esterase
scnpilot_p_inoc_scaffold_57_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19313..21697
DNA (2385bp) protein (795aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000375F13A rbh
Peptidase S9 {ECO:0000313|EMBL:GAN44953.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimini
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_p_inoc_scaffold_57_17
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(22087..22845)
DNA (759bp) protein (253aa)
Aureolysin n=1 Tax=Glaciecola arctica BSs20135 RepID=K6Z0X8_9ALTE
beta-glucosidase Tax=CG_Bacteroid_02
scnpilot_p_inoc_scaffold_57_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23222..23680
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EAA6D
membrane protease subunit, stomatin/prohibitin Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
membrane protease subunit, stomatin/prohibitin
scnpilot_p_inoc_scaffold_57_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23751..24413
DNA (663bp) protein (221aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUG2_9GAMM
16S rRNA methyltransferase
scnpilot_p_inoc_scaffold_57_20
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24410..25201
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003790276 rbh
Chromosome partitioning protein {ECO:0000313|EMBL:KGI76699.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagr
chromosome partitioning protein
scnpilot_p_inoc_scaffold_57_21
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25213..26088
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372ECF4
Chromosome partitioning protein ParB {ECO:0000313|EMBL:GAN45557.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="
ParB-like partition protein
scnpilot_p_inoc_scaffold_57_22
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26181..26897
DNA (717bp) protein (239aa)
dolichol-phosphate mannosyltransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037FAFCD rbh
dolichol-phosphate mannosyltransferase
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:AJC46436.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xant
scnpilot_p_inoc_scaffold_57_23

Not on your lists


27115..27351
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=2 Tax=mine drainage metagenome RepID=T1BC24_9ZZZZ
50S ribosomal protein L28 {ECO:0000313|EMBL:EQD67422.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L28
scnpilot_p_inoc_scaffold_57_24
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27365..27529
DNA (165bp) protein (55aa)
50S ribosomal protein L33 n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F7996
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
50S ribosomal protein L33
scnpilot_p_inoc_scaffold_57_25
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27835..28770
DNA (936bp) protein (312aa)
Sulfate-transporting ATPase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E1H4_9GAMM
ABC transporter {ECO:0000313|EMBL:KGI79065.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ABC transporter related
scnpilot_p_inoc_scaffold_57_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28767..29525
DNA (759bp) protein (253aa)
ABC transporter permease n=1 Tax=Dyella ginsengisoli RepID=UPI000348AEE3
ABC transporter permease {ECO:0000313|EMBL:EIL97223.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
hypothetical protein
scnpilot_p_inoc_scaffold_57_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29529..30878
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM6_9GAMM
ABC transporter
ABC transporter {ECO:0000313|EMBL:AHX15036.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_57_28
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30875..31669
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JP24_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45110.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_57_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31682..32494
DNA (813bp) protein (271aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035DF6E4
5-hydroxymethyluracil DNA glycosylase
scnpilot_p_inoc_scaffold_57_30
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32533..33153)
DNA (621bp) protein (207aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1121015 species="Bacteria; Prote
thymidine kinase (EC:2.7.1.21)
thymidine kinase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6465B rbh
Displaying items 1-30 of 253 in total

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