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scnpilot_p_inoc_scaffold_322

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_322_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

805..1491
DNA (687bp) protein (229aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000304B5C8
thiamine-phosphate synthase
scnpilot_p_inoc_scaffold_322_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1508..2791
DNA (1284bp) protein (428aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC06_9GAMM
scnpilot_p_inoc_scaffold_322_3
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2832..3950
DNA (1119bp) protein (373aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UN18_PSEUP rbh
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Cys/Met metabolism pyridoxal-phosphate-dependent protein {ECO:0000313|EMBL:AER55329.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudox
scnpilot_p_inoc_scaffold_322_4
unknown

Not on your lists

comp(3947..4603)
DNA (657bp) protein (219aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_322_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4948..5766)
DNA (819bp) protein (273aa)
Short chain dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W388_9GAMM rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EIL93929.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_p_inoc_scaffold_322_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5778..6368)
DNA (591bp) protein (197aa)
ATP-dependent protease n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B7117D
Peptidase S16 {ECO:0000313|EMBL:GAN44917.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimin
peptidase S16
scnpilot_p_inoc_scaffold_322_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6376..7731)
DNA (1356bp) protein (452aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Dyella ginsengisoli RepID=UPI000345480F rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:GAN44918.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthom
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
scnpilot_p_inoc_scaffold_322_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7756..8283)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379014A
Uncharacterized protein {ECO:0000313|EMBL:GAN44919.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_322_9

Not on your lists

comp(8374..8937)
DNA (564bp) protein (188aa)
Adenylate kinase {ECO:0000313|EMBL:EQD75297.1}; EC=2.7.4.- {ECO:0000313|EMBL:EQD75297.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage me
adenylate kinase-like kinase (EC:2.7.4.3)
adenylate kinase n=1 Tax=Dyella ginsengisoli RepID=UPI000344901B
scnpilot_p_inoc_scaffold_322_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9087..10346
DNA (1260bp) protein (420aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|
6-phosphofructokinase (EC:2.7.1.90)
6-phosphofructokinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDU0_9GAMM rbh
scnpilot_p_inoc_scaffold_322_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10370..11785
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379F7FF
Tax=BJP_IG2102_Gammaproteobacteria_62_140
scnpilot_p_inoc_scaffold_322_12
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12065..14134
DNA (2070bp) protein (690aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
hppA; pyrophosphatase (EC:3.6.1.1)
pyrophosphatase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EDD2D
scnpilot_p_inoc_scaffold_322_13
unknown

Not on your lists

comp(14342..15184)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036569F2
scnpilot_p_inoc_scaffold_322_14
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15433..16368
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZU21_DESOH
NAD-dependent epimerase/dehydratase
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_p_inoc_scaffold_322_15
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16392..17366
DNA (975bp) protein (325aa)
family 2 glycosyl transferase (EC:2.4.1.83)
Glycosyl transferase family 2 {ECO:0000313|EMBL:AFC24313.1}; EC=2.4.1.83 {ECO:0000313|EMBL:AFC24313.1};; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospira
Glycosyl transferase family 2 n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L9V0_SAPGL
scnpilot_p_inoc_scaffold_322_16
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17429..17791
DNA (363bp) protein (121aa)
Putative membrane protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IQQ8_9BURK
Putative membrane protein {ECO:0000313|EMBL:EIF33060.1}; Flags: Precursor;; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sourc
GtrA family protein
scnpilot_p_inoc_scaffold_322_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17765..18574)
DNA (810bp) protein (270aa)
Methyltransferase type 11 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YT0_RHOPB
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABD89706.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomon
scnpilot_p_inoc_scaffold_322_18
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18614..20557
DNA (1944bp) protein (648aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K7Q5_CUPNH
h16_A2890; hypothetical protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:CAJ93966.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" so
scnpilot_p_inoc_scaffold_322_19
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(20672..22756)
DNA (2085bp) protein (695aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U985_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KIJ71271.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
scnpilot_p_inoc_scaffold_322_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22851..24122)
DNA (1272bp) protein (424aa)
cystathionine beta-lyase/cystathionine gamma-synthase (EC:4.4.1.1) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
cystathionine beta-lyase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037133C0 rbh
cystathionine beta-lyase
scnpilot_p_inoc_scaffold_322_21
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(24140..25576)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I881_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01469.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
scnpilot_p_inoc_scaffold_322_22
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(26067..27374)
DNA (1308bp) protein (436aa)
Demethylrebeccamycin-D-glucose O-methyltransferase {ECO:0000313|EMBL:KJF15638.1}; EC=2.1.1.164 {ECO:0000313|EMBL:KJF15638.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimic
Methyltransferase type 12 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKT7_NITHX
methyltransferase type 12
scnpilot_p_inoc_scaffold_322_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27449..28819)
DNA (1371bp) protein (457aa)
cysteine synthase (EC:4.2.1.22)
cystathionine beta-synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003653816 rbh
Cystathionine beta-synthase {ECO:0000313|EMBL:GAN45670.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakii
scnpilot_p_inoc_scaffold_322_24
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29046..29276)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSQ4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45671.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_322_25
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29657..30625)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037C6596
ompA2; outer membrane protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_322_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30622..31080)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGE2_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_322_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31118..32221
DNA (1104bp) protein (368aa)
twitching motility protein PilT n=1 Tax=Dyella ginsengisoli RepID=UPI00034B5971
Twitching motility protein PilT {ECO:0000313|EMBL:KGI78493.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagr
twitching motility protein PilT
scnpilot_p_inoc_scaffold_322_28
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32237..33223)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003649A2B
SecC motif-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
aspartyl/asparaginyl beta-hydroxylase
scnpilot_p_inoc_scaffold_322_29
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33403..34053
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D6E6_CAUCE
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
scnpilot_p_inoc_scaffold_322_30
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34041..35852)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U895_XANAP rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN45631.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
Displaying items 1-30 of 94 in total

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