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scnpilot_p_inoc_scaffold_353

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_353_1
unknown

Not on your lists

comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_353_2
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(281..607)
DNA (327bp) protein (109aa)
Transcriptional regulator n=2 Tax=Burkholderia pseudomallei RepID=C0YAP1_BURPE
Uncharacterized protein {ECO:0000313|EMBL:EXI68064.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
predicted transcriptional regulators
scnpilot_p_inoc_scaffold_353_3
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(588..980)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N8W3_9BURK
hypothetical protein
hypothetical protein Tax=CG_Rhodof_01
scnpilot_p_inoc_scaffold_353_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1626..2168)
DNA (543bp) protein (181aa)
Lipocalin family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXQ8_9GAMM rbh
Lipocalin family protein {ECO:0000313|EMBL:EIL91999.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
bacterial lipocalin
scnpilot_p_inoc_scaffold_353_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2165..3280)
DNA (1116bp) protein (372aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXQ9_9GAMM rbh
Type 11 methyltransferase {ECO:0000313|EMBL:EIL92000.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
methyltransferase, cyclopropane fatty acid synthase
scnpilot_p_inoc_scaffold_353_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3277..4059)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92001.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_353_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4056..4607)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92002.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
Protein of unknown function (DUF2878)
scnpilot_p_inoc_scaffold_353_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4604..5881)
DNA (1278bp) protein (426aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR2_9GAMM rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EIL92003.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
methyltransferase, cyclopropane fatty acid synthase
scnpilot_p_inoc_scaffold_353_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5904..6701)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92004.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_353_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6701..7999)
DNA (1299bp) protein (433aa)
Dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR4_9GAMM rbh
Dehydrogenase {ECO:0000313|EMBL:EIL92005.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphyll
putative NAD/FAD-binding protein
scnpilot_p_inoc_scaffold_353_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8003..8947)
DNA (945bp) protein (315aa)
Fatty acid desaturase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR5_9GAMM rbh
Fatty acid desaturase {ECO:0000313|EMBL:EIL92006.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spa
fatty-acid desaturase
scnpilot_p_inoc_scaffold_353_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9177..9665
DNA (489bp) protein (163aa)
TspO and MBR like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR7_9GAMM
TspO and MBR like protein {ECO:0000313|EMBL:EIL92008.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
tryptophan-rich sensory protein
scnpilot_p_inoc_scaffold_353_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9775..10437)
DNA (663bp) protein (221aa)
Anti-ECFsigma factor ChrR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR9_9GAMM rbh
Anti-ECFsigma factor ChrR {ECO:0000313|EMBL:EIL92010.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
anti-ECFsigma factor, ChrR
scnpilot_p_inoc_scaffold_353_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10434..10964)
DNA (531bp) protein (177aa)
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS0_9GAMM
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL92011.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
RNA polymerase sigma factor, sigma-70 family
scnpilot_p_inoc_scaffold_353_15
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11406..13994)
DNA (2589bp) protein (863aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B56EFA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN44112.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_353_16
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14020..14457)
DNA (438bp) protein (146aa)
chemotaxis protein CheY n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B2E734
Uncharacterized protein {ECO:0000313|EMBL:KFN44113.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
response regulator receiver protein
scnpilot_p_inoc_scaffold_353_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(14454..16511)
DNA (2058bp) protein (686aa)
PAS domain S-box protein n=1 Tax=Leptospira sp. B5-022 RepID=M6D8S3_9LEPT rbh
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
multi-sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_353_18

Not on your lists

16873..17382
DNA (510bp) protein (170aa)
Competence/damage-inducible protein CinA n=1 Tax=mine drainage metagenome RepID=T1BS81_9ZZZZ
Competence/damage-inducible protein CinA {ECO:0000313|EMBL:EQD75766.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
damage-inducible protein CinA
scnpilot_p_inoc_scaffold_353_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17508..18539
DNA (1032bp) protein (344aa)
recombinase RecA n=1 Tax=Dyella japonica RepID=UPI00031954A7 rbh
recombinase RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1379159 species="Bacteria; Proteoba
scnpilot_p_inoc_scaffold_353_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18657..19154
DNA (498bp) protein (166aa)
RecX family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI000349CC6C
recombinase RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyell
scnpilot_p_inoc_scaffold_353_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19209..21872
DNA (2664bp) protein (888aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C783C
alanyl-tRNA synthetase
scnpilot_p_inoc_scaffold_353_22
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22206..22412
DNA (207bp) protein (69aa)
carbon storage regulator n=1 Tax=Halomonas lutea RepID=UPI0003782E77
carbon storage regulator
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thi
scnpilot_p_inoc_scaffold_353_23
unknown

Not on your lists

22655..23266
DNA (612bp) protein (204aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_353_24
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23098..24774)
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374DF86
DNA recombination protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
scnpilot_p_inoc_scaffold_353_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24911..25969
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003753DC3 rbh
HrcA family transcriptional regulator
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xan
scnpilot_p_inoc_scaffold_353_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26113..26640
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036CE07F
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria;
heat shock protein GrpE
scnpilot_p_inoc_scaffold_353_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26765..28678
DNA (1914bp) protein (638aa)
Chaperone protein DnaK n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI86_9GAMM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
chaperone protein DnaK
scnpilot_p_inoc_scaffold_353_28
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28779..29909
DNA (1131bp) protein (377aa)
molecular chaperone DnaJ n=1 Tax=Dyella japonica RepID=UPI0002FBEB4E rbh
molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella
scnpilot_p_inoc_scaffold_353_29

Not on your lists

29968..30762
DNA (795bp) protein (265aa)
Dihydrodipicolinate reductase n=1 Tax=mine drainage metagenome RepID=T0ZKH9_9ZZZZ
Dihydrodipicolinate reductase {ECO:0000313|EMBL:EQD45153.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
dihydrodipicolinate reductase
scnpilot_p_inoc_scaffold_353_30
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30771..32300)
DNA (1530bp) protein (510aa)
lysyl endopeptidase n=1 Tax=Salisaeta longa RepID=UPI0003B692C6
Uncharacterized protein {ECO:0000313|EMBL:ETX06040.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
prpL; Lysyl endopeptidase
Displaying items 1-30 of 80 in total

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