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scnpilot_p_inoc_scaffold_786

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_786_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(236..1675)
DNA (1440bp) protein (480aa)
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
exonuclease I (EC:3.1.11.1)
Exonuclease I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI04_9GAMM rbh
scnpilot_p_inoc_scaffold_786_2

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1785..2360
DNA (576bp) protein (192aa)
oligoribonuclease n=1 Tax=Rudaea cellulosilytica RepID=UPI0003745DD5
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:EQD38594.1}; Oligoribonuclease {ECO:0000313|EMBL:EQD66233.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagen
oligoribonuclease (3'->5' exoribonuclease)
scnpilot_p_inoc_scaffold_786_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2452..4026
DNA (1575bp) protein (525aa)
Oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Y7_9GAMM rbh
Oxidoreductase {ECO:0000313|EMBL:EIL95228.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphyl
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_p_inoc_scaffold_786_4
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4051..6114)
DNA (2064bp) protein (688aa)
TonB-dependent outermembrane copper receptor OprC n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HV13_PSEUO rbh
TonB-dependent receptor {ECO:0000313|EMBL:KES22864.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. A
TonB-dependent copper receptor
scnpilot_p_inoc_scaffold_786_5
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6251..9394)
DNA (3144bp) protein (1048aa)
cation transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036E8D90 rbh
Cation transporter {ECO:0000313|EMBL:KGM55918.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresis
czcA; heavy metal efflux pump CzcA
scnpilot_p_inoc_scaffold_786_6
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9396..10961)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DC8CB7
CzcB family heavy metal RND efflux membrane fusion protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
CzcB family heavy metal RND efflux membrane fusion protein
scnpilot_p_inoc_scaffold_786_7
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10958..12310)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000379C9FE rbh
Outer membrane efflux protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Outer membrane efflux protein
scnpilot_p_inoc_scaffold_786_8
unknown

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12469..12903
DNA (435bp) protein (145aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_786_9
unknown

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12994..13263
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_786_10
unknown

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comp(13526..14542)
DNA (1017bp) protein (339aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_786_11
unknown

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14892..15590
DNA (699bp) protein (233aa)
hypothetical protein
scnpilot_p_inoc_scaffold_786_12

Not on your lists

15593..17542
DNA (1950bp) protein (650aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T0Y4A2_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EQD29901.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_786_13
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17535..18563
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036596C8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16259.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_786_14
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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18640..20046
DNA (1407bp) protein (469aa)
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_p_inoc_scaffold_786_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20151..20402)
DNA (252bp) protein (84aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NM20_9GAMM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGG88781.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
scnpilot_p_inoc_scaffold_786_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20530..21399
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFG4_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88782.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
scnpilot_p_inoc_scaffold_786_17
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21533..22774)
DNA (1242bp) protein (414aa)
Phage integrase family protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BHT9_9XANT rbh
Phage integrase family protein {ECO:0000313|EMBL:EGD07973.1}; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
integrase-like protein
scnpilot_p_inoc_scaffold_786_18

Not on your lists

23524..23784
DNA (261bp) protein (87aa)
Transcriptional regulator, XRE family n=2 Tax=mine drainage metagenome RepID=T0YYV8_9ZZZZ
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EQD38243.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_p_inoc_scaffold_786_19
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23920..24201
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AKM2_BURRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW73694.1}; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia rhizo
scnpilot_p_inoc_scaffold_786_20
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24198..24719
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VR64_9GAMM
N-acetyltransferase GCN5
Putative GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDQ10909.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacill
scnpilot_p_inoc_scaffold_786_21
unknown

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comp(24839..25111)
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_786_22
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25517..26797
DNA (1281bp) protein (427aa)
Outer membrane protein, probably efflux family protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KNP5_STEMA rbh
Outer membrane protein {ECO:0000313|EMBL:KGQ17889.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonen
smmJ2; Outer membrane protein, probably efflux family protein
scnpilot_p_inoc_scaffold_786_23
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26794..28011
DNA (1218bp) protein (406aa)
Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KNP4_STEMA rbh
cusB2; Co/Zn/Cd efflux system membrane fusion protein; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
cusB2; Co/Zn/Cd efflux system membrane fusion protein
scnpilot_p_inoc_scaffold_786_24
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28042..31170
DNA (3129bp) protein (1043aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KNP3_STEMA rbh
cusA2; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA; K15726 cobalt-zinc-cadmium resistance protein CzcA Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
cusA2; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA
scnpilot_p_inoc_scaffold_786_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31167..31496
DNA (330bp) protein (110aa)
Nitrogen regulatory protein P-II n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KNP2_STEMA
glnB2; nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CCH12681.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomo
scnpilot_p_inoc_scaffold_786_26
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31585..32490
DNA (906bp) protein (302aa)
Putative cation efflux protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT10_9GAMM
putative cation efflux protein; K03295 cation efflux system protein, CDF family Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
cation efflux protein
scnpilot_p_inoc_scaffold_786_27
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32715..33128)
DNA (414bp) protein (138aa)
MerR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037EC9FC
MerR family transcriptional regulator {ECO:0000313|EMBL:KGM50686.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
putative transcriptional regulator
scnpilot_p_inoc_scaffold_786_28
unknown

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comp(33260..34039)
DNA (780bp) protein (260aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_786_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34819..36627
DNA (1809bp) protein (603aa)
Copper-resistance protein, CopA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NFL4_9GAMM rbh
copper-resistance protein, CopA family
Copper-resistance protein, CopA family {ECO:0000313|EMBL:AGG88842.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodano
scnpilot_p_inoc_scaffold_786_30
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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36624..37958
DNA (1335bp) protein (445aa)
CopB outer membrane protein involved in Cu(II)/Cu(I) resistance n=3 Tax=Cupriavidus RepID=Q58AD7_RALME rbh
copB1; Cu(II)/Cu(I) resistance outer membrane protein CopB
CopB outer membrane protein involved in Cu(II)/Cu(I) resistance {ECO:0000313|EMBL:ABF12972.1}; CopB protein {ECO:0000313|EMBL:CAI11330.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobac
Displaying items 1-30 of 34 in total

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