ggKbase home page

scnpilot_p_inoc_scaffold_999

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_999_1
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(860..3730)
DNA (2871bp) protein (957aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine d
glycine dehydrogenase (EC:1.4.4.2)
glycine dehydrogenase n=1 Tax=Dyella japonica RepID=UPI000317DC63
scnpilot_p_inoc_scaffold_999_2
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4150..5358
DNA (1209bp) protein (403aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL36984.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
Diguanylate cyclase id=2739873 bin=GWF1_Xanthomonadales_69_6 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_999_3
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5355..6065
DNA (711bp) protein (237aa)
haloacid dehalogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B352FB rbh
Haloacid dehalogenase {ECO:0000313|EMBL:KGM56382.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenicire
haloacid dehalogenase
scnpilot_p_inoc_scaffold_999_4
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6114..6866)
DNA (753bp) protein (251aa)
Transcriptional regulator, XRE family id=2430531 bin=GWF1_Xanthomonadales_69_6 species=Phenylobacterium zucineum genus=Phenylobacterium taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
transcriptional regulator, XRE family Tax=GWF1_Xanthomonadales_69_6_curated
transcriptional regulator, XRE family
scnpilot_p_inoc_scaffold_999_5
unknown

Not on your lists

comp(7374..7673)
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_999_6
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8217..9467
DNA (1251bp) protein (417aa)
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WTT3_9GAMM rbh
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_999_7
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9548..10300
DNA (753bp) protein (251aa)
ABC transporter-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD2_9GAMM rbh
antimicrobial peptide ABC transporter ATPase
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_999_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10362..12773
DNA (2412bp) protein (804aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003676465 rbh
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_999_9
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12785..15178
DNA (2394bp) protein (798aa)
Putative permease n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DBM7_MYXXD rbh
permease
Putative permease {ECO:0000313|EMBL:ABF85947.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xa
scnpilot_p_inoc_scaffold_999_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15310..17748
DNA (2439bp) protein (813aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U4C3_9DELT rbh
permease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
permease
scnpilot_p_inoc_scaffold_999_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17803..20178
DNA (2376bp) protein (792aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PE9_SOLUE
Permease {ECO:0000313|EMBL:AKF81687.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124
hypothetical protein
scnpilot_p_inoc_scaffold_999_12
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20260..20931
DNA (672bp) protein (224aa)
ABC transporter, ATP-binding protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SME1_9DELT
ABC transporter ATP-binding protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_999_13
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20968..21213
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VS40_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ20365.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
type II toxin-antitoxin system antitoxin Phd/YefM family protein
scnpilot_p_inoc_scaffold_999_14
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21210..21635
DNA (426bp) protein (142aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89SG6_BRADU
plasmid stability protein
scnpilot_p_inoc_scaffold_999_15
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21626..23020
DNA (1395bp) protein (465aa)
chemotaxis protein CheY n=1 Tax=Dyella ginsengisoli RepID=UPI00034BD6B9 rbh
two component, sigma54 specific, Fis family transcriptional regulator
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_999_16
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23075..24415
DNA (1341bp) protein (447aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WTU4_9GAMM rbh
putative sensory box histidine kinase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_999_17
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24475..25119
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E4989D
hypothetical protein
Uncharacterized conserved protein UCP020606 {ECO:0000313|EMBL:ADV27744.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;"
scnpilot_p_inoc_scaffold_999_18
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25212..27332
DNA (2121bp) protein (707aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362AC60 rbh
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:AFD07462.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteria
scnpilot_p_inoc_scaffold_999_19
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27539..27886)
DNA (348bp) protein (116aa)
Transport-associated n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1YZB4_BURA4
Transporter {ECO:0000313|EMBL:KDV22650.1}; TaxID=1395570 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source=
transport-associated
scnpilot_p_inoc_scaffold_999_20
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28069..28629)
DNA (561bp) protein (187aa)
Putative uncharacterized protein id=3023000 bin=GWF1_Xanthomonadales_69_6 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFL37455.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
putative N-acetyltransferase
scnpilot_p_inoc_scaffold_999_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29124..30833
DNA (1710bp) protein (570aa)
Metal-dependent amidohydrolase with the TIM-barrel fold protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVC1_9GAMM rbh
putative TIM-barrel fold metal-dependent hydrolase
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:AGG88659.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
Displaying 21 items

View Taxonomy