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scnpilot_p_inoc_scaffold_106_4

Organism: SCNpilot_P_inoc_Xanthomonadales_63_13

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5169..5726)

Top 3 Functional Annotations

Value Algorithm Source
Pilus biosynthesis protein {ECO:0000313|EMBL:GAN45217.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiib similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 183.0
  • Bit_score: 139
  • Evalue 5.90e-30
Putative type IV pilus assembly protein FimT id=2598317 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 158.0
  • Bit_score: 126
  • Evalue 3.70e-26
prepilin-type N-terminal cleavage/methylation domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 179.0
  • Bit_score: 108
  • Evalue 3.00e-21

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCGAGCGCAACCCCGGTACGCGACAGGCGTCACCCTGATCGAACTCATGATTGTGCTTTCCATCATCGCCGTGCTGACCACGATGGTCCTGCCCGCCTTTGGCAACCTGCTGCAGTCCAGCGCCTCACGCTCGGCGCGCAGCGCCCTGTCGGTGTCGATCAACCAGGCGCGCATTGGCGCGGCCATGCGCAGTCGCCAGGTCGTCGTCTGCCCCTCGGCGAATCAAGGTGACTGTGCGCACGACCTGCGCTGGCAGCACGGCTGGATCAGCTTCATCGACAACAACATGAACGGTGAACATGAAGCGACCGAGGAAATCATTGGCGTCACCCAGGCACAGCCGGCGGGCGTCGCCATCCTCAGCACCAGCGGGCGGCACCGGATCCGCTACCAGGCCGACGGCAGCTCCGACGGCAGCAACCTCACCCTGACCGTCTGCGACCGCCGCGGCGTGGCATCGGCAAGCGCACTGGTGGTCAGCAACTCGGGGCGCCTGCGCAGCGGCATCCCCAGCCCGAGCCAGGCGGCAGCAGCCTGCGCGGCCATCGGGAATTGA
PROTEIN sequence
Length: 186
MRAQPRYATGVTLIELMIVLSIIAVLTTMVLPAFGNLLQSSASRSARSALSVSINQARIGAAMRSRQVVVCPSANQGDCAHDLRWQHGWISFIDNNMNGEHEATEEIIGVTQAQPAGVAILSTSGRHRIRYQADGSSDGSNLTLTVCDRRGVASASALVVSNSGRLRSGIPSPSQAAAACAAIGN*