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scnpilot_p_inoc_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 216 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_106_1
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

1..297
DNA (297bp) protein (99aa)
Putative bacteriophage protein n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9ABV5_BURM1
putative bacteriophage protein
Uncharacterized protein {ECO:0000313|EMBL:CDE97858.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
scnpilot_p_inoc_scaffold_106_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(523..2364)
DNA (1842bp) protein (614aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Y7_9GAMM rbh
NhaP-type Na+(K+)/H+ antiporter {ECO:0000313|EMBL:EIL95578.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
NhaP-type Na+(K+)/H+ antiporter
scnpilot_p_inoc_scaffold_106_3
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2802..4586)
DNA (1785bp) protein (595aa)
OmpA family protein n=1 Tax=Cellvibrio sp. BR RepID=I3I8S0_9GAMM rbh
OmpA family protein {ECO:0000313|EMBL:EIK44455.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
OmpA family protein
scnpilot_p_inoc_scaffold_106_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5169..5726)
DNA (558bp) protein (186aa)
Pilus biosynthesis protein {ECO:0000313|EMBL:GAN45217.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiib
Putative type IV pilus assembly protein FimT id=2598317 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
prepilin-type N-terminal cleavage/methylation domain-containing protein
scnpilot_p_inoc_scaffold_106_5
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6008..8044
DNA (2037bp) protein (679aa)
excinuclease ABC subunit B n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036D68BB
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
scnpilot_p_inoc_scaffold_106_6
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8056..9030)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00037EDC31
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
scnpilot_p_inoc_scaffold_106_7
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9050..10471)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00037D6EDD rbh
membrane protein involved in D-alanine export DltB-like protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
membrane bound O-acyl transferase MBOAT family protein
scnpilot_p_inoc_scaffold_106_8
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10940..12940
DNA (2001bp) protein (667aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS16_PSEUU
threonyl-tRNA synthetase
scnpilot_p_inoc_scaffold_106_9

Not on your lists

13097..13504
DNA (408bp) protein (136aa)
Translation initiation factor IF-3 n=2 Tax=mine drainage metagenome RepID=T1B3I5_9ZZZZ
Translation initiation factor IF-3 {ECO:0000313|EMBL:EQD64447.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
translation initiation factor IF-3
scnpilot_p_inoc_scaffold_106_10
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13645..13842
DNA (198bp) protein (66aa)
Ribosomal protein L35 n=1 Tax=mine drainage metagenome RepID=T1A7E8_9ZZZZ
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lys
LSU ribosomal protein L35P
scnpilot_p_inoc_scaffold_106_11
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13856..14215
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Rudaea cellulosilytica RepID=UPI000375EEA3
LSU ribosomal protein L20P
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_106_12
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14324..15322
DNA (999bp) protein (333aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WNQ8_9GAMM
phenylalanyl-tRNA synthetase
scnpilot_p_inoc_scaffold_106_13
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15474..17873
DNA (2400bp) protein (800aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
phenylalanyl-tRNA synthetase, beta subunit (EC:6.1.1.20)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003693E00
scnpilot_p_inoc_scaffold_106_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17854..18156
DNA (303bp) protein (101aa)
Integration host factor subunit alpha n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXB8_9GAMM
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1163408 species="Bacteria; Proteobacte
integration host factor, alpha subunit
scnpilot_p_inoc_scaffold_106_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18134..18490
DNA (357bp) protein (119aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5D7_9GAMM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:EIL97861.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
scnpilot_p_inoc_scaffold_106_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18814..19776
DNA (963bp) protein (321aa)
prolyl aminopeptidase (EC:3.4.11.5) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
prolyl aminopeptidase (EC:3.4.11.5)
Proline iminopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5E0_9GAMM
scnpilot_p_inoc_scaffold_106_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20002..21510)
DNA (1509bp) protein (503aa)
ornithine/acetylornithine aminotransferase (EC:2.6.1.36)
lysine 6-aminotransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030F7D1D
Ornithine/acetylornithine aminotransferase {ECO:0000313|EMBL:EIL94684.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
scnpilot_p_inoc_scaffold_106_18
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21790..22689
DNA (900bp) protein (300aa)
ABC transporter ATPase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003999629 rbh
ABC transporter ATPase {ECO:0000313|EMBL:AKC87059.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthom
ABC transporter ATPase
scnpilot_p_inoc_scaffold_106_19
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22689..23453
DNA (765bp) protein (255aa)
ABC transporter n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UU16_PSEUP
ABC transporter permease {ECO:0000313|EMBL:KGO97939.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluv
ABC transporter
scnpilot_p_inoc_scaffold_106_20
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23556..24749
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003798498
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AJC47607.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
scnpilot_p_inoc_scaffold_106_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24813..25415
DNA (603bp) protein (201aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=M4NC32_9GAMM rbh
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:AGG88220.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonada
scnpilot_p_inoc_scaffold_106_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25457..26548
DNA (1092bp) protein (364aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNS2_9GAMM rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
scnpilot_p_inoc_scaffold_106_23
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26671..27792
DNA (1122bp) protein (374aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGA7_9GAMM rbh
scnpilot_p_inoc_scaffold_106_24
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27927..28982
DNA (1056bp) protein (352aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=mine drainage metagenome RepID=T0ZJS2_9ZZZZ
scnpilot_p_inoc_scaffold_106_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29005..30000)
DNA (996bp) protein (332aa)
octaprenyl-diphosphate synthase n=1 Tax=Dyella japonica RepID=UPI00036EF340
octaprenyl-diphosphate synthase
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:AIF46928.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonic
scnpilot_p_inoc_scaffold_106_26
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30120..31076)
DNA (957bp) protein (319aa)
Fe-S oxidoreductase n=1 Tax=Methylomicrobium buryatense RepID=UPI00037E38A7
radical SAM domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
scnpilot_p_inoc_scaffold_106_27
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31069..31905)
DNA (837bp) protein (279aa)
sterol desaturase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B47105
sterol desaturase-like protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
sterol desaturase
scnpilot_p_inoc_scaffold_106_28
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31902..32591)
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Methylomicrobium RepID=G4SX18_META2
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
scnpilot_p_inoc_scaffold_106_29
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32588..33277)
DNA (690bp) protein (230aa)
Putative glycosyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0G3_9GAMM
putative glycosyltransferase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
putative glycosyltransferase
scnpilot_p_inoc_scaffold_106_30
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33280..34338)
DNA (1059bp) protein (353aa)
arsenite methyltransferase n=1 Tax=Methylobacter marinus RepID=UPI0003673E8A rbh
As3mt; arsenite methyltransferase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
As3mt; arsenite methyltransferase
Displaying items 1-30 of 216 in total

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