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scnpilot_p_inoc_scaffold_256_26

Organism: SCNpilot_P_inoc_Xanthomonadales_63_13

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(25552..26097)

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor, ECF-like family protein {ECO:0000313|EMBL:KGQ19129.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 181.0
  • Bit_score: 159
  • Evalue 4.20e-36
Putative uncharacterized protein id=2495000 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 182.0
  • Bit_score: 157
  • Evalue 1.50e-35
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 184.0
  • Bit_score: 151
  • Evalue 2.30e-34

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGGGTGACATCACCGAACTGTTGCGTGCCGCCCAGTCGGGCGACAGCCGCTGCCTGGATGCGGTGTTCGCCCAGGTCTACGCGACCCTGCGCTCACTGGCGGCATCGCGGCTTGCCGCGCAATCGGGCGAGCACACGCTGGGCGCAACGGCACTGGTGCACGAGGCCTATCTCAAGCTCACCGGTGCGCAGGGCCTGGATCTCGTCGATCGCCATCATTTTTTCGCCTGCGCGGCGCGCGCCATGCGCCAGATCCTGGTCGATCGCGCGCGTGCCCGCGGAGCGCTGAAGCGGGGTGCCGATCTCGCCAGGGAGACTCTGGACCACGCCGAGGGAATTGCCGCAGCGGAGCCGGAACTGCTCGATGTCGATGCTGCACTCGATCGTCTCGATGCCATCGATCCGGGTGCGCGCGAACTGGTCGAGATGCGCGTCTTCGCCGGCCTCACCCTGGAGCAGCTTGCCGAATCGAGCGGCCGTTCCTTGCGCAGCGTCAACCGCGACTGGCAACGCGCGCGCGCATTGTTGCTGGCGCAACTGGATTGA
PROTEIN sequence
Length: 182
MGDITELLRAAQSGDSRCLDAVFAQVYATLRSLAASRLAAQSGEHTLGATALVHEAYLKLTGAQGLDLVDRHHFFACAARAMRQILVDRARARGALKRGADLARETLDHAEGIAAAEPELLDVDAALDRLDAIDPGARELVEMRVFAGLTLEQLAESSGRSLRSVNRDWQRARALLLAQLD*