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scnpilot_p_inoc_scaffold_256

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_256_1
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1562
DNA (1560bp) protein (520aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G2ZYP2_9RALS
CRISPR-associated protein, Csn1 family
scnpilot_p_inoc_scaffold_256_2
unknown

Not on your lists

comp(1537..1782)
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_256_3
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1837..2514
DNA (678bp) protein (226aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
CRISPR-associated endonuclease Cas1 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WH94_VEREI
CRISPR-associated Cas1 family protein
scnpilot_p_inoc_scaffold_256_4
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2567..2857
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaprote
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Sphingobium sp. AP49 RepID=J2WGH3_9SPHN
CRISPR-associated protein Cas2
scnpilot_p_inoc_scaffold_256_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4304..5137)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02016.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_p_inoc_scaffold_256_6
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5379..7514
DNA (2136bp) protein (712aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003697FD8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGI77321.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
diguanylate cyclase
scnpilot_p_inoc_scaffold_256_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7507..8178
DNA (672bp) protein (224aa)
carboxymethylenebutenolidase n=1 Tax=Dyella japonica RepID=UPI0002F133D5
carboxymethylenebutenolidase
Carboxymethylenebutenolidase {ECO:0000313|EMBL:AHX13833.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangninge
scnpilot_p_inoc_scaffold_256_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8175..8591
DNA (417bp) protein (139aa)
Diadenosine tetraphosphate hydrolase and other HIT family hydrolase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W7F2_MAGSA
Uncharacterized protein {ECO:0000313|EMBL:KGM55616.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
scnpilot_p_inoc_scaffold_256_9
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8588..10216
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D3F38 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37389.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
allophanate hydrolase
scnpilot_p_inoc_scaffold_256_10
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10361..11200
DNA (840bp) protein (280aa)
UPF0271 protein BN126_3495 n=1 Tax=Cronobacter sakazakii 680 RepID=K8D890_CROSK
LamB/YcsF family protein {ECO:0000313|EMBL:KGO99697.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluv
LamB/YcsF family protein
scnpilot_p_inoc_scaffold_256_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11228..11944
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382979C rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF46187.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_256_12
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11931..12902
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036982FE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX15476.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_256_13
Klebsiella quasipneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12899..13552
DNA (654bp) protein (218aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {
Pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000369ECF4
scnpilot_p_inoc_scaffold_256_14
unknown

Not on your lists

comp(13562..14185)
DNA (624bp) protein (208aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_256_15
unknown

Not on your lists

comp(14292..14648)
DNA (357bp) protein (119aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_256_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14665..15084)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372E0E8
Uncharacterized protein {ECO:0000313|EMBL:KGI77323.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
scnpilot_p_inoc_scaffold_256_17
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15133..15702)
DNA (570bp) protein (190aa)
dcd; deoxycytidine triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13] Tax=RBG_16_Gammaproteobacteria_62_13__curated
Deoxycytidine triphosphate deaminase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD0_9GAMM
deoxycytidine triphosphate deaminase
scnpilot_p_inoc_scaffold_256_18
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15745..16347)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B79745
Uncharacterized protein {ECO:0000313|EMBL:KFN41154.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
NADH:ubiquinone oxidoreductase
scnpilot_p_inoc_scaffold_256_19
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16347..17438)
DNA (1092bp) protein (364aa)
Chromosome partitioning ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8H6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN46021.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
ATPase
scnpilot_p_inoc_scaffold_256_20
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17601..18047
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:AJD49024.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax paci
scnpilot_p_inoc_scaffold_256_21
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18123..20258
DNA (2136bp) protein (712aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK78_9GAMM
methionyl-tRNA synthetase
scnpilot_p_inoc_scaffold_256_22
unknown

Not on your lists

20401..21405
DNA (1005bp) protein (335aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_256_23
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21547..22200
DNA (654bp) protein (218aa)
RnfABCDGE type electron transport complex subunit B n=1 Tax=Spiribacter salinus M19-40 RepID=R4V3L3_9GAMM
RnfABCDGE type electron transport complex subunit B
RnfABCDGE type electron transport complex subunit B {ECO:0000313|EMBL:AGM40594.1}; TaxID=1260251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribact
scnpilot_p_inoc_scaffold_256_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22197..22853
DNA (657bp) protein (219aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18 3.2.2.-)
Endonuclease III n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRB1_9GAMM rbh
scnpilot_p_inoc_scaffold_256_25
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22921..25548)
DNA (2628bp) protein (876aa)
Serine/threonine protein kinase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQ28_PSEUU rbh
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ADV26277.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseu
scnpilot_p_inoc_scaffold_256_26
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25552..26097)
DNA (546bp) protein (182aa)
Sigma factor, ECF-like family protein {ECO:0000313|EMBL:KGQ19129.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
Putative uncharacterized protein id=2495000 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_256_27
unknown

Not on your lists

comp(26258..28057)
DNA (1800bp) protein (600aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_256_28
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28282..29445)
DNA (1164bp) protein (388aa)
Porin {ECO:0000313|EMBL:AHY59638.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Phosphate-selective porin O and P id=2616549 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
polyphosphate-selective porin O
scnpilot_p_inoc_scaffold_256_29
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29707..30381
DNA (675bp) protein (225aa)
ribonuclease T n=1 Tax=Dyella japonica RepID=UPI00031AF575
ribonuclease T
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_256_30
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

30414..30695
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003789E59
FmdB family regulatory protein Tax=RBG_16_Planctomycetes_64_12_curated
Displaying items 1-30 of 151 in total

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