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scnpilot_p_inoc_scaffold_782_24

Organism: SCNpilot_P_inoc_Xanthomonadales_63_13

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 25925..28768

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-associated protein RapA {ECO:0000256|SAAS:SAAS00017181}; EC=3.6.4.- {ECO:0000256|SAAS:SAAS00017178};; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 882.0
  • Bit_score: 1192
  • Evalue 0.0
helicase SNF2 n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA934 similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 944.0
  • Bit_score: 1166
  • Evalue 0.0
DNA/RNA helicase, superfamily II, SNF2 family similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 944.0
  • Bit_score: 1162
  • Evalue 0.0

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2844
ATGGCTCTGGTTCCTGGTCAACGCTACATCTCGAATGCCGAACCCGAACTCGGACTCGGCACGCTGATCCGCATCGAAGGACGCAGCGTGCAGCTGCTCTATGCGACTGCGGGCGTCCTGCGCCAGTACGCGGTGCACAGCGCGCCGATCGCGCGCGCCGAATTCAGGGTCGGGCAGAAAGTCTCCGGCAAGGGATTCAGCCTGGTCATCGAGAGCGTCGCCGAGGACGACGGCCTGCTGGTCTATCGCGGCAGCGGCAAGACCCTCAACGAAACCGAGCTGGACGACAGCCAGTCGATTTCCAGGGCCGATGAACGCCTCGTTTCCGGCCGCGTCGATCGCGCCGACCATTTCGATTTCCGCCAGGAAGCACTGTTGCGCCGTGCCGATGCCTTGCGCTCGCCGGCCTGGGGCCTGGAATCCGCACGCATCGACCTGATTGCGCACCAGTTGCGCGTGGCCGAAATCGCCGCCGCGCGGCAACCCTTGCGCATCCTGTTGGCCGATGAGGTTGGCCTCGGCAAGACCATCGAAGCCGGCATGATCCTCGCCCGACTGCTCGCCAGCGGCCGCGTCGGACGCGTCCTCGTGCTGCTTCCGGAGACACTTGTCTACCAGTGGTTTGTCGAGCTGCTGCGCCGCTTCAACCTGCAATTCTCGTTGTTCGACGAGGAACGCTGCGAATCGATCGAGACCAGTGACCCGACGCGCAACCCGTTCCAGGACGAGCAACTGGTCATGGCCAGCATCGGCTTCCTCAGCGACTCGGCCAAGCGCACAGCGCAAGTCACCGAGGCCGGCTGGGACCTGGTCATTGTCGATGAGGCCCATCACCTGGCCTGGACCGAGGAAACGGCAAGCGCCCAATACACGCTGGTGGAAAACCTCGCCGCGCGCACGCCGGGTTTGATCCTGCTCACGGCGACGCCGGAACAACTCGGTCGCAGCGGCCACTTCGCGCGCCTGCGCCTGCTCGATCCGGCGCGCTACCACGACCTTCGCAGCTACGTGGCCGAAGCCGACAGTTTTACCGGCTTGTCGGAAATCGCCGGCCGTCTCAACGACGGCGAACCGCTGTCGGGCAACGACGTGAAGGCTCTTGCCGAGCGTTTCGGCGACGACGAGCAGCTCACCAGCCTGCTGGCCAGGCCGCTGGATGCCGCGGCGACGAACACCGTGCTTGATGCCCTGATCGATCGCCACGGCACCGGCCGGGTCATGTTCCGCAATCGCCGTGCCCAGGTTGGCGGTTTCCCCCGCCGTATCGCGCAGCTGGTCACCCTCGATGGCAGCGAGCTCGACGACGCGCAACGCCAGCACCTGCTTGCCGAGTTCCATGCCGACCTGCAGGCCACCGCGCCCGAGATCGAGCTGCCCTACGCGAATGATCCGCGCCTGAACTGGCTGCTTGGCATGATCGACCAGCTTGCCACGGAAAAATTCCTGTTGATCTGCCGCAGCCAGGCCAAGGTACTCGCACTCGAGGAGATCCTGCGCACGCGCAGCGGGGTCAAGGTCGCGCGCTTCCACGAGGGCATGAGCCTGCTGCAGCGGGATCGCAATGCCGCGTACTTTGCCGAAGCGGATGGCGCACGCCTGCTGTTGTGCTCGGAAATCGGATCGGAAGGGCGCAATTTCCAGTTTGCCCACCATCTCGTGCTGTGGGACTTACCGCTTGATCCGGACCTGCTCGAACAGCGCATCGGCCGGCTTGATCGAATTGGCCAGAAGCACGACATCCTCATCCATGCCTGTGCCTTTTCCGGTACCGCGCAGCACGCCCTGATGCGTTGGTTCGAGCTTGGCCTCGACGCGTTTCGCAGCAGCCCGTCCGATGGTCGCGAGCTGCTCAAGCGCTATGGCCAGCGCCTCGTCGAGGTCGCCGAACAGCATGCCCATGGCGGCGAGGATGCCGATTCCGAACTCGATGCGTTGATCGGCGCAACCCGGGCCAGCCACGAGGAGTTGTCGGCCCTGGTCAACAGCGGGCGCGATCGCCTGCTGGAACTGGCCAGCGCGCGGCAGAGCCACGCCGATCGCCTGCAGCGTGCGCTCGCCGCGGCCGACGCCAATCATGGCAATGACGAATTCATCCTGCGCCTATTCGAGCAGTTCGGCATCGAGAACGAGGAACTGGCACCGCGAACGGTCGTGCTCGATCCGGAATATCTCAGCACCGATGGTTTTCCCGGTCTCAAGGACGGCCCGCAGCAAGTCACCTTCGATCGCGGCATCGCCCTCGCCCGCGAGGACCTGCCGCTCTTGCGCATGGATCATCCCATGGTCAGCGGTGCCATCGACCTGCTGCTTGAAGGCGAACATGGCAACGCTTCGTTCCTGGTCGACGACACCCTGCCCGCGCGCAGCGCCATGCTCGAATGCATCTTCGTGCTGACCTGCGTCGCCGATCGCGAGCTGGCCGTCGATGGCTACCTGCCGCCGCTGCCGATCCGCATCGTCGTGGATTCGCGCCTGCTGCCTCGTCACGACTACCAACCCGCTGCGGACGCCGTGAAACGCTCGGCCGAGCGCGCCATCGAGTATTCACGCTATCGGAAACTGCTGGCCAAGCTGGTCAAGCCAATGCTCGCGCATGCCGAAACCCTGGCCCGAGAACGCGCACAGGTCGAAATCGGCGCGGCACTGACCACGATCGAGCATGAACTCGGTGACGAACATGCGCGCCTGGTTGCTCTGGCCCGGGTCAATCCGGCCGTGCGCGCAGAGGAAATCGAGGCCATCGATGCCGAACTGGAGGCCTTGCGCACCGCGATTCCGCAAGCGGCACCCCGCCTCGACGCGGTCCGCTTCATCTGCAGCACGGATTTCCTCAACCTCGCCTGA
PROTEIN sequence
Length: 948
MALVPGQRYISNAEPELGLGTLIRIEGRSVQLLYATAGVLRQYAVHSAPIARAEFRVGQKVSGKGFSLVIESVAEDDGLLVYRGSGKTLNETELDDSQSISRADERLVSGRVDRADHFDFRQEALLRRADALRSPAWGLESARIDLIAHQLRVAEIAAARQPLRILLADEVGLGKTIEAGMILARLLASGRVGRVLVLLPETLVYQWFVELLRRFNLQFSLFDEERCESIETSDPTRNPFQDEQLVMASIGFLSDSAKRTAQVTEAGWDLVIVDEAHHLAWTEETASAQYTLVENLAARTPGLILLTATPEQLGRSGHFARLRLLDPARYHDLRSYVAEADSFTGLSEIAGRLNDGEPLSGNDVKALAERFGDDEQLTSLLARPLDAAATNTVLDALIDRHGTGRVMFRNRRAQVGGFPRRIAQLVTLDGSELDDAQRQHLLAEFHADLQATAPEIELPYANDPRLNWLLGMIDQLATEKFLLICRSQAKVLALEEILRTRSGVKVARFHEGMSLLQRDRNAAYFAEADGARLLLCSEIGSEGRNFQFAHHLVLWDLPLDPDLLEQRIGRLDRIGQKHDILIHACAFSGTAQHALMRWFELGLDAFRSSPSDGRELLKRYGQRLVEVAEQHAHGGEDADSELDALIGATRASHEELSALVNSGRDRLLELASARQSHADRLQRALAAADANHGNDEFILRLFEQFGIENEELAPRTVVLDPEYLSTDGFPGLKDGPQQVTFDRGIALAREDLPLLRMDHPMVSGAIDLLLEGEHGNASFLVDDTLPARSAMLECIFVLTCVADRELAVDGYLPPLPIRIVVDSRLLPRHDYQPAADAVKRSAERAIEYSRYRKLLAKLVKPMLAHAETLARERAQVEIGAALTTIEHELGDEHARLVALARVNPAVRAEEIEAIDAELEALRTAIPQAAPRLDAVRFICSTDFLNLA*