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scnpilot_p_inoc_scaffold_844

Search features with annotation key words

Displaying items 61-90 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_844_61
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60495..61925
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQQ5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH44264.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_844_62
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61941..62885
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYW1_9SPHN rbh
A alpha-helical domain with a conserved ER moti {ECO:0000313|EMBL:KHL26626.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;
hypothetical protein
scnpilot_p_inoc_scaffold_844_63
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62889..63704
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WIB9_9SPHN rbh
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:AKH44266.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.
transglutaminase-like protein
scnpilot_p_inoc_scaffold_844_64
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63800..64522
DNA (723bp) protein (241aa)
Peptidase T1 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3V8_9SPHN rbh
Peptidase T1 family protein {ECO:0000313|EMBL:GAD47706.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
hypothetical protein
scnpilot_p_inoc_scaffold_844_65
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64698..65345
DNA (648bp) protein (216aa)
Response regulator FixJ n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WIC2_9SPHN
LuxR family transcriptional regulator protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_p_inoc_scaffold_844_66
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65361..65939)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHQ4_9SPHN
Extensin {ECO:0000313|EMBL:KHK90936.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiens
hypothetical protein
scnpilot_p_inoc_scaffold_844_67
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66288..67262
DNA (975bp) protein (325aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
Phosphoserine aminotransferase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I2E8_9SPHN
phosphoserine aminotransferase
scnpilot_p_inoc_scaffold_844_68
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67359..68945
DNA (1587bp) protein (529aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYV6_9SPHN rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:GAD47703.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
3-phosphoglycerate dehydrogenase
scnpilot_p_inoc_scaffold_844_69
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69073..69318
DNA (246bp) protein (82aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI38_9SPHN
ATP phosphoribosyltransferase regulatory subunit {ECO:0000313|EMBL:GAD47702.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobi
tRNA synthetase, class II (G, H, P and S)
scnpilot_p_inoc_scaffold_844_70
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69302..70228
DNA (927bp) protein (309aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C9P7_9SPHN
ATP phosphoribosyltransferase regulatory subunit {ECO:0000313|EMBL:EIZ80190.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobiu
tRNA synthetase, class II (G, H, P and S)
scnpilot_p_inoc_scaffold_844_71
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70249..71163)
DNA (915bp) protein (305aa)
LipQ n=1 Tax=Sphingomonas sp. LH128 RepID=J8W0Z0_9SPHN rbh
esterase/lipase/thioesterase Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
LipQ
scnpilot_p_inoc_scaffold_844_72
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71406..72695
DNA (1290bp) protein (430aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
Adenylosuccinate synthetase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=PURA_NOVAD rbh
scnpilot_p_inoc_scaffold_844_73
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72734..73225
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCU8_ERYLH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC62493.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_p_inoc_scaffold_844_74
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73308..74324
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCU6_ERYLH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC62495.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_p_inoc_scaffold_844_75
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74370..75173)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IE52_9SPHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA90577.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_844_76
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75210..75989)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SI23_9SPHN rbh
Scaffold2, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33799.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
hypothetical protein rbh
scnpilot_p_inoc_scaffold_844_77
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76022..78487)
DNA (2466bp) protein (822aa)
Putative TonB-dependent receptor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YH89_9SPHN rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAD47435.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
TonB-dependent receptor
scnpilot_p_inoc_scaffold_844_78
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78630..78821)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7M6_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55629.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_844_79
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78932..79390)
DNA (459bp) protein (153aa)
Putative Rrf2 family DNA binding protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3A4_9SPHN
Putative Rrf2 family DNA binding protein {ECO:0000313|EMBL:GAD47441.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
hypothetical protein
scnpilot_p_inoc_scaffold_844_80
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79462..81207)
DNA (1746bp) protein (582aa)
Putative transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHP2_9SPHN rbh
Putative transporter {ECO:0000313|EMBL:GAD47442.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobiu
hypothetical protein
scnpilot_p_inoc_scaffold_844_81
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81469..82131
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y337_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47341.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_844_82
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82156..82572)
DNA (417bp) protein (139aa)
KDP operon transcriptional regulatory protein KdpE n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMI8_9SPHN
Fis family transcriptional regulator
Fis family transcriptional regulator {ECO:0000313|EMBL:AJP70615.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
scnpilot_p_inoc_scaffold_844_83
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82544..85237)
DNA (2694bp) protein (898aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
Sensor protein KdpD n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMI9_9SPHN rbh
kdpD; sensor protein KdpD rbh
scnpilot_p_inoc_scaffold_844_84
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85234..85827)
DNA (594bp) protein (198aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase C chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMJ0_9SPHN
kdpC; potassium-transporting ATPase subunit C
scnpilot_p_inoc_scaffold_844_85
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85843..87858)
DNA (2016bp) protein (672aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMJ1_9SPHN rbh
kdpB; potassium-transporting ATPase subunit B rbh
scnpilot_p_inoc_scaffold_844_86
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87870..89573)
DNA (1704bp) protein (568aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase A chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMJ2_9SPHN rbh
kdpA; potassium-transporting ATPase A chain rbh
scnpilot_p_inoc_scaffold_844_87
unknown

Not on your lists

comp(89587..89676)
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_844_88
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89764..90096)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQD3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47584.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_844_89
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90294..93260)
DNA (2967bp) protein (989aa)
TonB-dependent receptor n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IF22_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:KHK93511.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
TonB-dependent receptor rbh
scnpilot_p_inoc_scaffold_844_90
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93257..93901)
DNA (645bp) protein (215aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IF24_9SPHN
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KHK93513.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
ECF subfamily RNA polymerase sigma-70 factor
Displaying items 61-90 of 96 in total

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