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scnpilot_p_inoc_scaffold_562_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(3..431)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1G7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 143.0
  • Bit_score: 276
  • Evalue 1.30e-71
TetR family transcriptional regulator {ECO:0000313|EMBL:ENY81312.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 143.0
  • Bit_score: 276
  • Evalue 1.80e-71
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 143.0
  • Bit_score: 104
  • Evalue 2.50e-20

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGGAGAGGACCTCAACCATCAAACGGCGCGATGCCGTTGCAACCCGCGCGTCTATATTGGCGGCCGCGCACCAACGCTTTCTGCGTGAGGCGTATGAGAATGTCGGACTGCGCGACATTGCGGGCGATGCCGGGGTCGATGTCGCGCTGATCAGCCGCTATTTCGGCGGCAAGGAAGGCCTGTTCCGCGAAGTCGTCAGCGACGAAGCAAAGCCCCATTTGTTCCGCGAGCCCAAAAGCATCGACGAATTGCCCGGTTTTCTGGCGCAACTCGTCGCCGAAGACGATGACGCCGATCGCCATCATCGCATGGAGATGTTCGTCATCATGCTGCGCTCGGCCTCGTCTCCCAAGGCGGGCGATATCATCCGCGAACTGGTCAACCGCGACGTTCTGGAGCCGCTCGCCGGAACGATCGGCGGCGATCAG
PROTEIN sequence
Length: 143
MERTSTIKRRDAVATRASILAAAHQRFLREAYENVGLRDIAGDAGVDVALISRYFGGKEGLFREVVSDEAKPHLFREPKSIDELPGFLAQLVAEDDDADRHHRMEMFVIMLRSASSPKAGDIIRELVNRDVLEPLAGTIGGDQ