ggKbase home page

scnpilot_p_inoc_scaffold_562_9

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(11006..11554)

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN84_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 172.0
  • Bit_score: 146
  • Evalue 2.60e-32
Transcriptional regulator SlyA {ECO:0000313|EMBL:AKH44207.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 173.0
  • Bit_score: 185
  • Evalue 9.30e-44
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 172.0
  • Bit_score: 146
  • Evalue 7.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGATGGCGGAACAATCGGCAGGCGATGAGGCCGCACAAGCGGGGCAGACCTTCGGCCCCATCGGCATCGGCCCTTTCCGCGAAGGCGATGCCACGCCGGACATCTATTTCACAATCTCGCTGGTGCTGGCCGCGCGCCGCTGGCGCTCTCTGCTGGATGAGAAGCTGCGCCCGATCAACCAGAGTTCCGCCCGGATGGAGGCGATGTCCGCCATTCTCAACTCTCCCACGCTCAGCCCGCAGGTGGATATTGCGCGGCGTCTGCGGATCGAAGGGCCCACGCTGACGCGGATGCTCGATTCGCTGGAGAAGGACGGGCTGGTGGAACGCCTGCCCGACCCGAAGGACCGCCGCACCAAGCTGTTGCGGCTGACGCCGGAGGGCGAGGCCGCGCTGGAACAGGTATTCGCCATTGCCCGGGAATGGCGAGCCCGCCTGCTGGATGGCTTCGCGGAAGAGGATATGGAACAGGCCACCCGTTTCTGCACCGCGCTGGTCGGGCGGCTCGATACCGGCCTGGATAGCAAGGGGCCCGAAGGCGGCGCGTAA
PROTEIN sequence
Length: 183
MMAEQSAGDEAAQAGQTFGPIGIGPFREGDATPDIYFTISLVLAARRWRSLLDEKLRPINQSSARMEAMSAILNSPTLSPQVDIARRLRIEGPTLTRMLDSLEKDGLVERLPDPKDRRTKLLRLTPEGEAALEQVFAIAREWRARLLDGFAEEDMEQATRFCTALVGRLDTGLDSKGPEGGA*