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scnpilot_p_inoc_scaffold_562_11

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(12223..13851)

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase {ECO:0000313|EMBL:CCW18825.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CCW18825.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 528.0
  • Bit_score: 701
  • Evalue 6.70e-199
Choline dehydrogenase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNM1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 528.0
  • Bit_score: 701
  • Evalue 4.80e-199
glucose-methanol-choline oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 526.0
  • Bit_score: 682
  • Evalue 1.10e-193

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1629
ATGGTTGGCATGGTTTACCGGGGGGTAAGGAAAGTGGAACCCGATCTTATTGTAATCGGCGGCGGCTCGGCCGGCTGCGCGGTGGCCGGCAGGCTCGCCGAAGCGGGCAAGCGCGTGGTTTTGCTGGAAGCCGGCAAGGATGCGCGTGACATTCGCTCGCGCGTGCCTGCCTTGATGGGCAAGCTGGTCCAGAACCCGGAGTTCGACTGGTGCTATTTCGGGGAGCCCGATCCTTCGGTGGGCGGCCGCCCCGGCCCCTGGCCCGCAGGCAAGCGCCTGGGCGGTGGCAGCACCATCAACGGCATGATGTTCATCCGTGGCCATGCCTGGGATTACGACCGCTGGGCCGAACTGGGCGCCAAGGGCTGGGACCATGCATCCTGCCTGCCCTATTTCCGGCGGCTGGAAGATAATGAGCGCGGGGAAGATACCTGGCGCGGCACCGGCGGGCCGATTGCCGTTTCCGAATGCCGCAGCCGCTATCCCATCACCGATAAATGGATCGACGCCGCGAGCGAGGCAGGCATTCGCCGCGCCAAGGATCTCAATGGCGAGTTGGCCGAAGGCGTGGACTATATCCAGCTTTCGCAGCGCCGGGGCTGGCGTAGCTCCAGCGCGAGCTATCTCGATGGGCTGGGCAATGGCCTGAAGCCCGATGTGGTGACCGAAGCGCAGGTCCTGTCCATCGAAGTGGCAGATGGGCGGGCCCGCGGCGTGACCTATCAGCGCGGCGGCCAGCTGCACAGCCTGCGCGCGCGCGAAGGCGTGGTGCTTTCCGCCGGTGCGCTCAACACGCCGCGCCTGCTGATGCTTTCCGGCATTGGCCCCGCGCAGCATCTGCGCGACATGGGCATCGACGTGCTGCGCGATCTTCCGGGCGTGGGCAGCAATCTGCAGGACCACGCCGGGCTCCACCTGATCAACACGGTGGACATGCACACGCTGAACAATGACGCGCATGGCCTGCGCGCGCCGTTGCAATTGCTGCGCTTCATCTTCGGCGGCACCGGAGCGCTGACCACCGGCATCGGCCATGCCCAGGCTTTCGTGCGCAGCCGGCCGGGCCTGCCCGTGCCCAATCTGCAACTCGCCTTCTCGGCCTTCTCCTTCGAAGTGACGCCGCAAGGCAATGTGGTGCTGAAGCCCGAATCCTCGGTCGCCACCTTCATCGGACTGATGCGCCCCGCCCATCGCGGACGGGTCAGCCTGCGTTCGGGCGATCCGGCGGCGGCCCCGGTGATCGAACATCAGTTGCTGGGCGACGATGACGATGTGGAACAGCTGGTGGAAGGGATTGCCCTCGCACGCCGGATCATGCGCCAGCGTTCGATGGAATCCCACGTGCTGCACGAAGTGCGCCCCGGCGCCGATTTCGAAAGCAAGGAAGCCCTGCGCGACTATGTGCGCCTCGCCTCCATGTCGATGTTCCACCCGGTCGGCACAGCCAAGATCGGCCCCGATGGCGATCCCGATGCGGTGCTGGACGCGGATTTGCGGGTGCGCGGCGTCAGCGGGCTATGGGTGGCCGATGCCTCGGTCATGCCCACCATCCCGCAAGGCAATACCAACGCCACCTCGATCATGATCGGAGACAAGGCGGCAGACCATATCCTGCGCACGGTGGCCTAG
PROTEIN sequence
Length: 543
MVGMVYRGVRKVEPDLIVIGGGSAGCAVAGRLAEAGKRVVLLEAGKDARDIRSRVPALMGKLVQNPEFDWCYFGEPDPSVGGRPGPWPAGKRLGGGSTINGMMFIRGHAWDYDRWAELGAKGWDHASCLPYFRRLEDNERGEDTWRGTGGPIAVSECRSRYPITDKWIDAASEAGIRRAKDLNGELAEGVDYIQLSQRRGWRSSSASYLDGLGNGLKPDVVTEAQVLSIEVADGRARGVTYQRGGQLHSLRAREGVVLSAGALNTPRLLMLSGIGPAQHLRDMGIDVLRDLPGVGSNLQDHAGLHLINTVDMHTLNNDAHGLRAPLQLLRFIFGGTGALTTGIGHAQAFVRSRPGLPVPNLQLAFSAFSFEVTPQGNVVLKPESSVATFIGLMRPAHRGRVSLRSGDPAAAPVIEHQLLGDDDDVEQLVEGIALARRIMRQRSMESHVLHEVRPGADFESKEALRDYVRLASMSMFHPVGTAKIGPDGDPDAVLDADLRVRGVSGLWVADASVMPTIPQGNTNATSIMIGDKAADHILRTVA*