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scnpilot_p_inoc_scaffold_562_41

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(49867..51051)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA22E similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 412.0
  • Bit_score: 431
  • Evalue 8.80e-118
  • rbh
Integrase {ECO:0000313|EMBL:GAO55220.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1. similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 377.0
  • Bit_score: 641
  • Evalue 7.90e-181
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 393.0
  • Bit_score: 411
  • Evalue 3.50e-112

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGGCCTCGCGCGCGCGTAACAAACTTTCGGCTAGGCAAGTGGCCGCATTAACGGAGCCCAATGTCTACTCTGACGGCGGTGGACTCTACCTTCGCATCCGTGCTTCAGGGCGCTCCTGGTTCTTCATCGGCACGTTGGATGGAAAGCGAATCGAGCTTGGGCTGGGCTCAGCTCTCGATGTGTCCCTGGCAAAAGCGCGGGAGCGGGCAGCAGAAATTCGCGCGATGCTGATCGACGGAAGCGACCCCCGCGCCGAGCGCGCCAAAGCCAAGCTTCAGAAAAAACCTGTCGTGACCTTTGGTGCTTTCGCCATGGAATTGCTCGACGACATCGAAGACGGATTTAAAAATCCCAAGCATCGCCAGCAGTGGCGCAGCACGCTGACGAGCTACGCCCAGCCCCTGTTTGCTGTGCCGATCAACGAGGTAACAACCGAACAGATTCTGGCCGTGCTTCAGCCGATCTGGCTGAGCAAGGCCGAGACTGCCTCGCGGCTTCGTGGGCGGATCGAACGGATTCTTGATGCAGCAAAAGCGAAAGGACTGAGGGTCGGCGAAAACCCGGCAAGAGGGCGCGGCCACCTCGACTTGTTACTGCCCAAGCGAAGCAAGATTTCGGTCAAGCACCATCCCGCCCTACCCTTCGCTCAAATCTCTTCATTCATGGCCACCTTGCGCGACCGGCCTGCCGTTGCAGCACGAGCGCTGGAGTTTGTGATCTTGACCGCCGCGCGGTCAGGAGAAGTGCGCGGCATGACATGGGGTGAGATAGATCTGGAAGCCCGGGTTTGGACAGTGCCGGCTGCTCGCATGAAGGCGGGGTTTATCCACGAAGTGCCGCTCAGCGATGCGGCAATGGCCATTTTGGCAGGAATGAAGGAAGAAGGCCTCAAGCCAACCGACTTTGTGTTTCCTGCACCGCGCGGGGGCTCACTCTCCGATATGGCGCTCTCGCAATTGCTCAAGCGCATGGAGCGACCCGACATCACCGTTCATGGCTTTCGCTCCACCTTCAGGGACTGGGCAGGAGAAACGACCCAGTTTGGCCGCGAAGAAGTCGAAATGGCGCTTGCCCATACCGTGGCCTCATCGGTTGAACGCGCTTACCGAAGAGGGAGAGCCTTGGAAAAGCGCCGTGATTTGATGGCAGCCTGGGCTAAATATTGCTCAGGCACTGAGAATTAA
PROTEIN sequence
Length: 395
MASRARNKLSARQVAALTEPNVYSDGGGLYLRIRASGRSWFFIGTLDGKRIELGLGSALDVSLAKARERAAEIRAMLIDGSDPRAERAKAKLQKKPVVTFGAFAMELLDDIEDGFKNPKHRQQWRSTLTSYAQPLFAVPINEVTTEQILAVLQPIWLSKAETASRLRGRIERILDAAKAKGLRVGENPARGRGHLDLLLPKRSKISVKHHPALPFAQISSFMATLRDRPAVAARALEFVILTAARSGEVRGMTWGEIDLEARVWTVPAARMKAGFIHEVPLSDAAMAILAGMKEEGLKPTDFVFPAPRGGSLSDMALSQLLKRMERPDITVHGFRSTFRDWAGETTQFGREEVEMALAHTVASSVERAYRRGRALEKRRDLMAAWAKYCSGTEN*